rows { options { physical_type: PHYSICAL_STREAM_TYPE_QUADS max_name_table_size: 128 max_prefix_table_size: 16 max_datatype_table_size: 16 logical_type: LOGICAL_STREAM_TYPE_DATASETS version: 2 } } rows { prefix { value: "https://w3id.org/np/" } } rows { name { value: "RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4" } } rows { namespace { name: "this" value { prefix_id: 1 } } } rows { prefix { value: "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/" } } rows { name { } } rows { namespace { name: "sub" value { prefix_id: 2 } } } rows { prefix { value: "http://www.nanopub.org/nschema#" } } rows { namespace { name: "np" value { prefix_id: 3 name_id: 2 } } } rows { prefix { value: "http://purl.org/dc/terms/" } } rows { namespace { name: "dct" value { prefix_id: 4 name_id: 2 } } } rows { prefix { value: "https://w3id.org/np/o/ntemplate/" } } rows { namespace { name: "nt" value { prefix_id: 5 name_id: 2 } } } rows { prefix { value: "http://purl.org/nanopub/x/" } } rows { namespace { name: "npx" value { prefix_id: 6 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/2001/XMLSchema#" } } rows { namespace { name: "xsd" value { prefix_id: 7 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/2000/01/rdf-schema#" } } rows { namespace { name: "rdfs" value { prefix_id: 8 name_id: 2 } } } rows { prefix { value: "https://orcid.org/" } } rows { namespace { name: "orcid" value { prefix_id: 9 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/ns/prov#" } } rows { namespace { name: "prov" value { prefix_id: 10 name_id: 2 } } } rows { prefix { value: "http://xmlns.com/foaf/0.1/" } } rows { namespace { name: "foaf" value { prefix_id: 11 name_id: 2 } } } rows { name { value: "hasAssertion" } } rows { name { value: "assertion" } } rows { name { value: "Head" } } rows { quad { s_iri { prefix_id: 1 name_id: 1 } p_iri { prefix_id: 3 name_id: 3 } o_iri { prefix_id: 2 } g_iri { } } } rows { name { value: "hasProvenance" } } rows { name { value: "provenance" } } rows { quad { p_iri { prefix_id: 3 } o_iri { prefix_id: 2 } } } rows { name { value: "hasPublicationInfo" } } rows { name { value: "pubinfo" } } rows { quad { p_iri { prefix_id: 3 } o_iri { prefix_id: 2 } } } rows { prefix { value: "http://www.w3.org/1999/02/22-rdf-syntax-ns#" } } rows { name { value: "type" } } rows { name { value: "Nanopublication" } } rows { quad { p_iri { prefix_id: 12 } o_iri { prefix_id: 3 } } } rows { name { value: "get-biochementities-from-space-members" } } rows { name { value: "description" } } rows { quad { s_iri { prefix_id: 2 } p_iri { prefix_id: 4 } o_literal { lex: "Like \'Get the classes of an ontology from space members\', but links classes to the ontology via dct:isPartOf (the predicate used by the biochementity template). Returns the biochementities (owl:Class) that declare dct:isPartOf the given resource, restricted to nanopubs published by an admin, maintainer, or member of the space that maintains the resource. The maintaining space and its validated member public-key hashes are resolved server-side from the spaces repo (/repo/spaces); observers are excluded. Each class URI appears once, kept from the latest (by nanopub timestamp) member-published definition. Superclass labels are taken from the superclass\' own rdfs:label when it is a biochementity in the same ontology. The types column lists any rdf:type assignments besides owl:Class. The last_modified_by/last_modified columns give the signer and timestamp of that latest definition; the signer name is resolved from the trust repo (/repo/trust) or left blank." } g_iri { prefix_id: 2 name_id: 4 } } } rows { name { value: "license" } } rows { prefix { value: "http://www.apache.org/licenses/" } } rows { name { value: "LICENSE-2.0" } } rows { quad { p_iri { prefix_id: 4 name_id: 14 } o_iri { prefix_id: 13 } } } rows { prefix { value: "https://w3id.org/kpxl/grlc/" } } rows { name { value: "grlc-query" } } rows { quad { p_iri { prefix_id: 12 name_id: 10 } o_iri { prefix_id: 14 name_id: 16 } } } rows { name { value: "label" } } rows { quad { p_iri { prefix_id: 8 } o_literal { lex: "Get the biochementities of an ontology from space members" } } } rows { name { value: "endpoint" } } rows { prefix { value: "https://w3id.org/np/l/nanopub-query-1.1/repo/type/" } } rows { name { value: "e8cc5bb29ec5597303f8f101c65c545dc124ee0df68ce733764b03adc3237184" } } rows { quad { p_iri { prefix_id: 14 } o_iri { prefix_id: 15 } } } rows { name { value: "sparql" } } rows { quad { p_iri { prefix_id: 14 } o_literal { lex: "prefix owl: \n prefix rdfs: \n prefix dct: \n prefix np: \n prefix npa: \n prefix npx: \n prefix skos: \n prefix gen: \n prefix foaf: \n\n select ?class ?class_label ?description ?superclasses_multi_iri ?superclasses_label_multi\n ?types_multi_iri ?types_label_multi\n ?last_modified_by (sample(?lmbl) as ?last_modified_by_label) ?last_modified\n ?np ?np_label where {\n {\n select ?class ?class_label (?definition as ?description)\n (group_concat(distinct str(?superclass); separator=\" \") as ?superclasses_multi_iri)\n (group_concat(distinct replace(replace(coalesce(?superclass_lbl, str(?superclass)), \"\\\\\\\\\", \"\\\\\\\\\\\\\\\\\"), \"[\\r\\n]+\", \"\\\\\\\\n\"); separator=\"\\n\") as ?superclasses_label_multi)\n (group_concat(distinct str(?type); separator=\" \") as ?types_multi_iri)\n (group_concat(distinct replace(replace(replace(str(?type), \"^.*[/#]\", \"\"), \"\\\\\\\\\", \"\\\\\\\\\\\\\\\\\"), \"[\\r\\n]+\", \"\\\\\\\\n\"); separator=\"\\n\") as ?types_label_multi)\n (sample(?user) as ?last_modified_by) (sample(?date) as ?last_modified)\n ?np (\"^\" as ?np_label) where {\n values ?_ontology_multi_iri {}\n service {\n graph npa:graph { npa:thisRepo npa:hasCurrentSpaceState ?stateG . }\n graph ?stateG {\n ?_ontology_multi_iri npa:isMaintainedBy? ?space .\n ?ri a gen:RoleInstantiation ; npa:forSpace ?space ; npa:forAgent ?agent ;\n npa:hasRoleType ?rt .\n filter(?rt in (gen:AdminRole, gen:MaintainerRole, gen:MemberRole))\n ?acct a npa:AccountState ; npa:agent ?agent ; npa:pubkey ?pubkey .\n }\n }\n graph npa:graph {\n ?np npx:hasNanopubType owl:Class .\n ?np npa:hasValidSignatureForPublicKeyHash ?pubkey .\n filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKeyHash ?pubkey . }\n ?np dct:created ?date .\n ?np npx:introduces ?class .\n ?np np:hasAssertion ?a .\n optional { ?np npx:signedBy ?user . }\n }\n graph ?a {\n ?class dct:isPartOf ?_ontology_multi_iri .\n optional { ?class rdfs:label ?class_label . }\n optional { ?class skos:definition ?definition . }\n optional { ?class rdfs:subClassOf ?superclass . filter(isIRI(?superclass)) }\n optional { ?class a ?type . filter(?type != owl:Class) }\n }\n filter not exists {\n service {\n graph npa:graph { npa:thisRepo npa:hasCurrentSpaceState ?stateG2 . }\n graph ?stateG2 {\n ?_ontology_multi_iri npa:isMaintainedBy? ?space2 .\n ?ri2 a gen:RoleInstantiation ; npa:forSpace ?space2 ; npa:forAgent ?agent2 ;\n npa:hasRoleType ?rt2 .\n filter(?rt2 in (gen:AdminRole, gen:MaintainerRole, gen:MemberRole))\n ?acct2 a npa:AccountState ; npa:agent ?agent2 ; npa:pubkey ?pubkey2 .\n }\n }\n graph npa:graph {\n ?np2 npx:hasNanopubType owl:Class .\n ?np2 npa:hasValidSignatureForPublicKeyHash ?pubkey2 .\n filter not exists { ?np2x npx:invalidates ?np2 ; npa:hasValidSignatureForPublicKeyHash ?pubkey2 . }\n ?np2 dct:created ?date2 .\n ?np2 npx:introduces ?class .\n ?np2 np:hasAssertion ?a2 .\n }\n graph ?a2 { ?class dct:isPartOf ?_ontology_multi_iri . }\n filter(?date2 > ?date || (?date2 = ?date && str(?np2) > str(?np)))\n }\n optional {\n select ?superclass (sample(?sclbl) as ?superclass_lbl) where {\n values ?_ontology_multi_iri {}\n graph npa:graph { ?scnp npx:hasNanopubType owl:Class ; npx:introduces ?superclass ; np:hasAssertion ?sca . }\n graph ?sca { ?superclass dct:isPartOf ?_ontology_multi_iri ; rdfs:label ?sclbl . }\n } group by ?superclass\n }\n } group by ?class ?class_label ?definition ?np\n }\n optional {\n service {\n graph npa:graph { npa:thisRepo npa:hasCurrentTrustState ?tg . }\n graph ?tg { ?last_modified_by foaf:name ?lmbl . }\n }\n }\n }\n group by ?class ?class_label ?description ?superclasses_multi_iri ?superclasses_label_multi ?types_multi_iri ?types_label_multi ?last_modified_by ?last_modified ?np ?np_label\n order by ?class_label" } } } rows { name { value: "wasAttributedTo" } } rows { name { value: "0000-0002-1267-0234" } } rows { quad { s_iri { prefix_id: 2 name_id: 4 } p_iri { prefix_id: 10 name_id: 21 } o_iri { prefix_id: 9 } g_iri { prefix_id: 2 name_id: 7 } } } rows { name { value: "name" } } rows { quad { s_iri { prefix_id: 9 name_id: 22 } p_iri { prefix_id: 11 } o_literal { lex: "Tobias Kuhn" } g_iri { prefix_id: 2 name_id: 9 } } } rows { name { value: "created" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#dateTime" } } rows { quad { s_iri { prefix_id: 1 name_id: 1 } p_iri { prefix_id: 4 name_id: 24 } o_literal { lex: "2026-06-25T09:46:44Z" datatype: 1 } } } rows { name { value: "creator" } } rows { quad { p_iri { } o_iri { prefix_id: 9 name_id: 22 } } } rows { prefix { value: "https://creativecommons.org/publicdomain/zero/1.0/" } } rows { quad { p_iri { prefix_id: 4 name_id: 14 } o_iri { prefix_id: 16 name_id: 2 } } } rows { name { value: "embeds" } } rows { quad { p_iri { prefix_id: 6 name_id: 26 } o_iri { prefix_id: 2 name_id: 12 } } } rows { quad { p_iri { prefix_id: 8 name_id: 17 } o_literal { lex: "Get the biochementities of an ontology from space members" } } } rows { name { value: "wasCreatedFromProvenanceTemplate" } } rows { name { value: "RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU" } } rows { quad { p_iri { prefix_id: 5 name_id: 27 } o_iri { prefix_id: 1 } } } rows { name { value: "wasCreatedFromPubinfoTemplate" } } rows { name { value: "RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8" } } rows { quad { p_iri { prefix_id: 5 } o_iri { prefix_id: 1 } } } rows { name { value: "RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw" } } rows { quad { o_iri { } } } rows { name { value: "RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI" } } rows { quad { o_iri { } } } rows { name { value: "wasCreatedFromTemplate" } } rows { name { value: "RAEFAt-QcFK0ZhqfvlsmS10BnzGJA0xwOICZXkO-ai87k" } } rows { quad { p_iri { prefix_id: 5 } o_iri { prefix_id: 1 } } } rows { name { value: "sig" } } rows { name { value: "hasAlgorithm" } } rows { quad { s_iri { prefix_id: 2 } p_iri { prefix_id: 6 } o_literal { lex: "RSA" } } } rows { name { value: "hasPublicKey" } } rows { quad { p_iri { } o_literal { lex: "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCwUtewGCpT5vIfXYE1bmf/Uqu1ojqnWdYxv+ySO80ul8Gu7m8KoyPAwuvaPj0lvPtHrg000qMmkxzKhYknEjq8v7EerxZNYp5B3/3+5ZpuWOYAs78UnQVjbHSmDdmryr4D4VvvNIiUmd0yxci47dTFUj4DvfHnGd6hVe5+goqdcwIDAQAB" } } } rows { name { value: "hasSignature" } } rows { quad { p_iri { } o_literal { lex: "fx7AX/PZSm3hQ+TnyF+bgz1nmC1CO3z5VYDgXzhgYzjmk+ORKTPXwwgPdeXk6qlpxMZDvLY3/1ld0k1m2jSvW7XFV3IUUkpn53VQkZ+sw3VpKYrMC5EQ+VMv5FwpVZVQ9LezhOuXPNwvJXbEFqD7M1RZcJyKrGb1BOsCAF2qII8=" } } } rows { name { value: "hasSignatureTarget" } } rows { quad { p_iri { } o_iri { prefix_id: 1 name_id: 1 } } } rows { name { value: "signedBy" } } rows { quad { p_iri { prefix_id: 6 name_id: 40 } o_iri { prefix_id: 9 name_id: 22 } } }