[ { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/pubinfo", "@graph": [ { "@id": "https://orcid.org/0000-0002-1267-0234", "http://xmlns.com/foaf/0.1/name": [ { "@value": "Tobias Kuhn" } ] }, { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4", "http://purl.org/dc/terms/created": [ { "@value": "2026-06-25T09:46:44Z", "@type": "http://www.w3.org/2001/XMLSchema#dateTime" } ], "http://purl.org/dc/terms/creator": [ { "@id": "https://orcid.org/0000-0002-1267-0234" } ], "http://purl.org/dc/terms/license": [ { "@id": "https://creativecommons.org/publicdomain/zero/1.0/" } ], "http://purl.org/nanopub/x/embeds": [ { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/get-biochementities-from-space-members" } ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Get the biochementities of an ontology from space members" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate": [ { "@id": "https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate": [ { "@id": "https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8" }, { "@id": "https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw" }, { "@id": "https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate": [ { "@id": "https://w3id.org/np/RAEFAt-QcFK0ZhqfvlsmS10BnzGJA0xwOICZXkO-ai87k" } ] }, { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/sig", "http://purl.org/nanopub/x/hasAlgorithm": [ { "@value": "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey": [ { "@value": "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCwUtewGCpT5vIfXYE1bmf/Uqu1ojqnWdYxv+ySO80ul8Gu7m8KoyPAwuvaPj0lvPtHrg000qMmkxzKhYknEjq8v7EerxZNYp5B3/3+5ZpuWOYAs78UnQVjbHSmDdmryr4D4VvvNIiUmd0yxci47dTFUj4DvfHnGd6hVe5+goqdcwIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature": [ { "@value": "fx7AX/PZSm3hQ+TnyF+bgz1nmC1CO3z5VYDgXzhgYzjmk+ORKTPXwwgPdeXk6qlpxMZDvLY3/1ld0k1m2jSvW7XFV3IUUkpn53VQkZ+sw3VpKYrMC5EQ+VMv5FwpVZVQ9LezhOuXPNwvJXbEFqD7M1RZcJyKrGb1BOsCAF2qII8=" } ], "http://purl.org/nanopub/x/hasSignatureTarget": [ { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4" } ], "http://purl.org/nanopub/x/signedBy": [ { "@id": "https://orcid.org/0000-0002-1267-0234" } ] } ] }, { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/assertion", "@graph": [ { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/get-biochementities-from-space-members", "http://purl.org/dc/terms/description": [ { "@value": "Like 'Get the classes of an ontology from space members', but links classes to the ontology via dct:isPartOf (the predicate used by the biochementity template). Returns the biochementities (owl:Class) that declare dct:isPartOf the given resource, restricted to nanopubs published by an admin, maintainer, or member of the space that maintains the resource. The maintaining space and its validated member public-key hashes are resolved server-side from the spaces repo (/repo/spaces); observers are excluded. Each class URI appears once, kept from the latest (by nanopub timestamp) member-published definition. Superclass labels are taken from the superclass' own rdfs:label when it is a biochementity in the same ontology. The types column lists any rdf:type assignments besides owl:Class. The last_modified_by/last_modified columns give the signer and timestamp of that latest definition; the signer name is resolved from the trust repo (/repo/trust) or left blank." } ], "http://purl.org/dc/terms/license": [ { "@id": "http://www.apache.org/licenses/LICENSE-2.0" } ], "@type": [ "https://w3id.org/kpxl/grlc/grlc-query" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Get the biochementities of an ontology from space members" } ], "https://w3id.org/kpxl/grlc/endpoint": [ { "@id": "https://w3id.org/np/l/nanopub-query-1.1/repo/type/e8cc5bb29ec5597303f8f101c65c545dc124ee0df68ce733764b03adc3237184" } ], "https://w3id.org/kpxl/grlc/sparql": [ { "@value": "prefix owl: \n prefix rdfs: \n prefix dct: \n prefix np: \n prefix npa: \n prefix npx: \n prefix skos: \n prefix gen: \n prefix foaf: \n\n select ?class ?class_label ?description ?superclasses_multi_iri ?superclasses_label_multi\n ?types_multi_iri ?types_label_multi\n ?last_modified_by (sample(?lmbl) as ?last_modified_by_label) ?last_modified\n ?np ?np_label where {\n {\n select ?class ?class_label (?definition as ?description)\n (group_concat(distinct str(?superclass); separator=\" \") as ?superclasses_multi_iri)\n (group_concat(distinct replace(replace(coalesce(?superclass_lbl, str(?superclass)), \"\\\\\\\\\", \"\\\\\\\\\\\\\\\\\"), \"[\\r\\n]+\", \"\\\\\\\\n\"); separator=\"\\n\") as ?superclasses_label_multi)\n (group_concat(distinct str(?type); separator=\" \") as ?types_multi_iri)\n (group_concat(distinct replace(replace(replace(str(?type), \"^.*[/#]\", \"\"), \"\\\\\\\\\", \"\\\\\\\\\\\\\\\\\"), \"[\\r\\n]+\", \"\\\\\\\\n\"); separator=\"\\n\") as ?types_label_multi)\n (sample(?user) as ?last_modified_by) (sample(?date) as ?last_modified)\n ?np (\"^\" as ?np_label) where {\n values ?_ontology_multi_iri {}\n service {\n graph npa:graph { npa:thisRepo npa:hasCurrentSpaceState ?stateG . }\n graph ?stateG {\n ?_ontology_multi_iri npa:isMaintainedBy? ?space .\n ?ri a gen:RoleInstantiation ; npa:forSpace ?space ; npa:forAgent ?agent ;\n npa:hasRoleType ?rt .\n filter(?rt in (gen:AdminRole, gen:MaintainerRole, gen:MemberRole))\n ?acct a npa:AccountState ; npa:agent ?agent ; npa:pubkey ?pubkey .\n }\n }\n graph npa:graph {\n ?np npx:hasNanopubType owl:Class .\n ?np npa:hasValidSignatureForPublicKeyHash ?pubkey .\n filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKeyHash ?pubkey . }\n ?np dct:created ?date .\n ?np npx:introduces ?class .\n ?np np:hasAssertion ?a .\n optional { ?np npx:signedBy ?user . }\n }\n graph ?a {\n ?class dct:isPartOf ?_ontology_multi_iri .\n optional { ?class rdfs:label ?class_label . }\n optional { ?class skos:definition ?definition . }\n optional { ?class rdfs:subClassOf ?superclass . filter(isIRI(?superclass)) }\n optional { ?class a ?type . filter(?type != owl:Class) }\n }\n filter not exists {\n service {\n graph npa:graph { npa:thisRepo npa:hasCurrentSpaceState ?stateG2 . }\n graph ?stateG2 {\n ?_ontology_multi_iri npa:isMaintainedBy? ?space2 .\n ?ri2 a gen:RoleInstantiation ; npa:forSpace ?space2 ; npa:forAgent ?agent2 ;\n npa:hasRoleType ?rt2 .\n filter(?rt2 in (gen:AdminRole, gen:MaintainerRole, gen:MemberRole))\n ?acct2 a npa:AccountState ; npa:agent ?agent2 ; npa:pubkey ?pubkey2 .\n }\n }\n graph npa:graph {\n ?np2 npx:hasNanopubType owl:Class .\n ?np2 npa:hasValidSignatureForPublicKeyHash ?pubkey2 .\n filter not exists { ?np2x npx:invalidates ?np2 ; npa:hasValidSignatureForPublicKeyHash ?pubkey2 . }\n ?np2 dct:created ?date2 .\n ?np2 npx:introduces ?class .\n ?np2 np:hasAssertion ?a2 .\n }\n graph ?a2 { ?class dct:isPartOf ?_ontology_multi_iri . }\n filter(?date2 > ?date || (?date2 = ?date && str(?np2) > str(?np)))\n }\n optional {\n select ?superclass (sample(?sclbl) as ?superclass_lbl) where {\n values ?_ontology_multi_iri {}\n graph npa:graph { ?scnp npx:hasNanopubType owl:Class ; npx:introduces ?superclass ; np:hasAssertion ?sca . }\n graph ?sca { ?superclass dct:isPartOf ?_ontology_multi_iri ; rdfs:label ?sclbl . }\n } group by ?superclass\n }\n } group by ?class ?class_label ?definition ?np\n }\n optional {\n service {\n graph npa:graph { npa:thisRepo npa:hasCurrentTrustState ?tg . }\n graph ?tg { ?last_modified_by foaf:name ?lmbl . }\n }\n }\n }\n group by ?class ?class_label ?description ?superclasses_multi_iri ?superclasses_label_multi ?types_multi_iri ?types_label_multi ?last_modified_by ?last_modified ?np ?np_label\n order by ?class_label" } ] } ] }, { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/provenance", "@graph": [ { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/assertion", "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://orcid.org/0000-0002-1267-0234" } ] } ] }, { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/Head", "@graph": [ { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4", "http://www.nanopub.org/nschema#hasAssertion": [ { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/assertion" } ], "http://www.nanopub.org/nschema#hasProvenance": [ { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo": [ { "@id": "https://w3id.org/np/RA-AB1iDSPzDpv3VvzQBDSWMElDGnYb8F-iva2kYyQYN4/pubinfo" } ], "@type": [ "http://www.nanopub.org/nschema#Nanopublication" ] } ] } ]