Nanopublication

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ID

https://w3id.org/np/RA34_jToFXNCTchMWIf1Ap6lwZRXWv5fsEJuq-9qo9wzg

Formats

.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt

Content

@prefix this: <https://w3id.org/np/RA34_jToFXNCTchMWIf1Ap6lwZRXWv5fsEJuq-9qo9wzg> .
@prefix sub: <https://w3id.org/np/RA34_jToFXNCTchMWIf1Ap6lwZRXWv5fsEJuq-9qo9wzg/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix mvikg: <http://example.org/mvikg/> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix sosa: <http://www.w3.org/ns/sosa/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  sub:variant a <http://purl.obolibrary.org/obo/SO_0000694>, biolink:SequenceVariant;
    mvikg:alt "Val";
    mvikg:effect "decamer-stabilizing mutation; increased conformational stability in most regions except the active site loop and resolving cysteine region";
    mvikg:evidenceText "the T77V mutation resulted in an increase in conformational stability in most regions of the protein except for the active site loop and the region encompassing the resolving cysteine";
    mvikg:ref "Thr";
    dct:isPartOf <https://w3id.org/spaces/mvikg/r/kg>;
    rdfs:comment "T77V";
    rdfs:label "PMC3079231-Salmonella_typhimurium-variant2";
    biolink:start_coordinate "77"^^xsd:integer .
  
  <https://www.ncbi.nlm.nih.gov/gene/1252128> a biolink:Gene;
    sosa:isFeatureOfInterestOf <https://w3id.org/np/RAsleYmeoDiAB_oH3EJuVb_Hisg0vVQHBHZFP1IkjKfIk/sample>;
    biolink:has_sequence_variant sub:variant .
}

sub:provenance {
  sub:assertion prov:wasDerivedFrom <https://w3id.org/mvikg/abox#VARIANT-VAR_002-1252128> .
}

sub:pubinfo {
  this: dct:created "2026-11-10T08:59:04Z"^^xsd:dateTime;
    dct:creator orcid:0009-0005-5515-1230;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:introduces sub:variant;
    npx:supersedes <https://w3id.org/np/RA2vLGGRapsgDJAVq3qqlUKIFRUJHuNjIeg9B6EmfC29c>;
    nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RAHKGU7g81YLKWl0S7g0oKdiRD5LhcPFMjVkAgLnipR_g>;
    nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RA-N4_kFxcruvBTlo1yJv29E4SLOXsx5KO_th69PprMrA>,
      <https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8>, <https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw>;
    nt:wasCreatedFromTemplate <https://w3id.org/np/RAnlONjGChImRjDeXxTwrTmndhfv1guES7EnXlp1CaE3g/templateVersion> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAjO3oH8Lq/l1oZIUY3FlCz5DnndybGvAhBdmEJ/yq7Nv3GZEYPrEro23rCBCp0GiriOXlVbk61pA/7JFE6tqzTresINW6QQMxE9sIhCBlX4cG66JFD8ud6bMvUyzCR8LQA6zfrSbafGE06rvglJd4MDUcTwvUKqtL9UCnOaowVfnZ3sPOe9EqlmJuO3iHGxBSXMPOPEJZUzMXsFDWFuMZTnrR8gY3r5nVF5a8L/MD135ZH8qW5yGXOB28CmVYCAbw2o07QEKzyzFKN+W1gfnprYZvuKzwGexnzcdzc1S8N/M5bzhWQ40EKCEqgUE8c81OzEMm1HUlUKEJ/o5I/FKKAwIDAQAB";
    npx:hasSignature "Xxgenj3oNCB0xLohQ6L7lcTN9ZrbaA3XdrfNVEER8GjtitRYn/NB7iCRoTjRtmL6zFz972aNAXia3waAP/WGobtsm0rYFM3jfbMSuDP8DfL92BAFE0ZWS0b8nhUjyuQCPK/eX0LaWDG6olqEWOII1zdUZk+XY+734U9ZQZWrPus9TofvzxOp7H8gloSJNmq1OIvVLAYg+HlhXnfZ1m1sOnwIhD1Ygbz3ueLWHO8obQuJOZyFiXS1N6ZbwgoXtycG5ZemeNHEyTSmzBwVJxD+t2+wq/pG28vBj1okhpr/n+2rZ6mSNa94Q4LSZUB5W9O4zeYmK1l61y0/HQEpYZId+w==";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0009-0005-5515-1230 .
}