Nanopublication

ID

https://w3id.org/np/RA37ilNFyE-ceTfwRxvb78lRhB9k24H0MsxtYYnKV2yfk
Formats

Content

@prefix this: <https://w3id.org/np/RA37ilNFyE-ceTfwRxvb78lRhB9k24H0MsxtYYnKV2yfk> .
@prefix sub: <https://w3id.org/np/RA37ilNFyE-ceTfwRxvb78lRhB9k24H0MsxtYYnKV2yfk/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix mvikg: <http://example.org/mvikg/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix sosa: <http://www.w3.org/ns/sosa/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <https://w3id.org/np/RAoeAEtsqZEM4eTOml-5W2cHvk_R5Z9_hDeSgbOmPDWpo/variant> a <http://purl.obolibrary.org/obo/SO_0001059>,
      biolink:SequenceVariant;
    mvikg:effect "significant decrease in killing of C. albicans filaments at 25C after 5 days; repressed filamentation and biofilm formation by C. albicans";
    mvikg:evidenceText "deleting the sopB gene (which encodes inositol phosphatase) was associated with a significant decrease in C. albicans killing at 25 C after 5 days";
    dct:isPartOf <https://w3id.org/spaces/mvikg/r/kg>;
    rdfs:comment "VAR_001";
    rdfs:label "PMC3127670-Salmonella_enterica_serovar_Typhimurium-variant1" .
  
  <https://www.ncbi.nlm.nih.gov/gene/1252609> a biolink:Gene;
    sosa:isFeatureOfInterestOf <https://w3id.org/np/RASIX1-iaGiKLAtjx24MiwwhU_FIc_j3zMHeLOuuY05BE/sample>;
    biolink:has_sequence_variant <https://w3id.org/np/RAoeAEtsqZEM4eTOml-5W2cHvk_R5Z9_hDeSgbOmPDWpo/variant> .
}

sub:provenance {
  sub:assertion prov:wasDerivedFrom <https://w3id.org/mvikg/abox#VARIANT-VAR_001-1252609> .
}

sub:pubinfo {
  this: dct:created "2026-11-10T10:29:01Z"^^xsd:dateTime;
    dct:creator orcid:0009-0005-5515-1230;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:hasNanopubType npx:ExampleNanopub;
    npx:introduces <https://w3id.org/np/RAoeAEtsqZEM4eTOml-5W2cHvk_R5Z9_hDeSgbOmPDWpo/variant>;
    npx:supersedes <https://w3id.org/np/RAoeAEtsqZEM4eTOml-5W2cHvk_R5Z9_hDeSgbOmPDWpo>;
    skos:changeNote "Corrected the nt:wasCreatedFromProvenanceTemplate/PubinfoTemplate links, which previously pointed at the meta-templates used to define templates rather than the actual provenance/pubinfo templates used to create this nanopub. Also stabilized npx:introduces to this record's originally published resource IRI so repeated corrections resolve to one current version instead of appearing as unrelated records.";
    nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RAHKGU7g81YLKWl0S7g0oKdiRD5LhcPFMjVkAgLnipR_g>;
    nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RA-N4_kFxcruvBTlo1yJv29E4SLOXsx5KO_th69PprMrA>,
      <https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8>, <https://w3id.org/np/RAKc76yHLDbloE6ObluzYQsfX37v6qrZXbYeIKpe8-YUo>,
      <https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw>;
    nt:wasCreatedFromTemplate <https://w3id.org/np/RAnlONjGChImRjDeXxTwrTmndhfv1guES7EnXlp1CaE3g/templateVersion> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAjO3oH8Lq/l1oZIUY3FlCz5DnndybGvAhBdmEJ/yq7Nv3GZEYPrEro23rCBCp0GiriOXlVbk61pA/7JFE6tqzTresINW6QQMxE9sIhCBlX4cG66JFD8ud6bMvUyzCR8LQA6zfrSbafGE06rvglJd4MDUcTwvUKqtL9UCnOaowVfnZ3sPOe9EqlmJuO3iHGxBSXMPOPEJZUzMXsFDWFuMZTnrR8gY3r5nVF5a8L/MD135ZH8qW5yGXOB28CmVYCAbw2o07QEKzyzFKN+W1gfnprYZvuKzwGexnzcdzc1S8N/M5bzhWQ40EKCEqgUE8c81OzEMm1HUlUKEJ/o5I/FKKAwIDAQAB";
    npx:hasSignature "GJ3crjZG90JlDzmhcOxwAlAXZm5np6EthxeiphAHU93Wwg/umAKD2CyTwvyjzWMItHo8RpH439rxf0fRz80sOlv8p0BYzY8BaYgNVcqv1pHZY6IZSfwuwzQC++aDG1P9wNbE+wx+WOp1G08IKFb38uSAOtEMSTy6y4JX7tKw1XMacGYR23OxDqC4jUM6aEBvb0l98QBTT9xdnROw0cyYw/sM0mTLj2Qjknd9UL/CNu1+5GW13XBk/NapvZDM2y5a5FtjN8fyo6W1XDRisc9hons3RWiyyRkNKCb6ABSKDUENMVubQxunGbPI58nC+IaQm2kLz2v/Rz5AjlOsvFIR9w==";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0009-0005-5515-1230 .
}