https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/Head https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://www.nanopub.org/nschema#hasAssertion https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/assertion https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://www.nanopub.org/nschema#hasProvenance https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/provenance https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://www.nanopub.org/nschema#hasPublicationInfo https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/pubinfo https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.nanopub.org/nschema#Nanopublication https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/assertion https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/graphite-runtime-benchmark http://purl.org/dc/terms/description On the Campylobacter benchmark Graphite ran in 8 minutes 57 seconds on one thread and 3 minutes 27 seconds on 20 threads, using 3.38 to 4.86 GB of memory, against 10 minutes 16 seconds and 9.63 GB for E-MEM and 34 minutes 22 seconds and over 15 GB for bfMEM. On a human versus mouse comparison Graphite reported 4,169,580 matches in 0.20 GB, against 1,849,841,302 matches in 49 GB for CopMEM2. https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/graphite-runtime-benchmark http://purl.org/spar/cito/isDocumentedBy https://doi.org/10.1093/nargab/lqae142 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/graphite-runtime-benchmark http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.obolibrary.org/obo/ECO_0000000 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/graphite-runtime-benchmark http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.obolibrary.org/obo/ECO_0007672 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/graphite-runtime-benchmark http://www.w3.org/2000/01/rdf-schema#label Runtime and memory benchmark results https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/graphite-runtime-benchmark http://www.w3.org/ns/prov#wasGeneratedBy https://w3id.org/np/RAW2eqpYko0g-C5Pnv4bsmGZHGM7PDKljapa4oqcD4i18/graphite-development https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/provenance https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0002-0758-5190 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0002-9496-733X https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0003-2329-7890 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0009-0004-6984-1294 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/assertion http://www.w3.org/ns/prov#wasDerivedFrom https://doi.org/10.1093/nargab/lqae142 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/pubinfo http://purl.obolibrary.org/obo/ECO_0000000 http://www.w3.org/2000/01/rdf-schema#label evidence http://purl.obolibrary.org/obo/ECO_0007672 http://www.w3.org/2000/01/rdf-schema#label computational evidence https://orcid.org/0000-0002-0758-5190 http://xmlns.com/foaf/0.1/name Aldert L. Zomer https://orcid.org/0000-0002-9496-733X http://xmlns.com/foaf/0.1/name Sebastian Deorowicz https://orcid.org/0000-0003-2329-7890 http://xmlns.com/foaf/0.1/name Bas E. Dutilh https://orcid.org/0009-0004-6984-1294 http://xmlns.com/foaf/0.1/name Rick Beeloo https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://purl.org/dc/terms/created 2026-09-07T11:25:11Z https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://purl.org/dc/terms/creator https://w3id.org/np/RAuTlT6ESRHfYrofQSuAQtOHeF6BanRUXJc6eY9kEH5UM/zonmw-bot https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://purl.org/dc/terms/license https://creativecommons.org/publicdomain/zero/1.0/ https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://purl.org/nanopub/x/hasNanopubType http://purl.obolibrary.org/obo/ECO_0000000 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://purl.org/nanopub/x/introduces https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/graphite-runtime-benchmark https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 http://www.w3.org/2000/01/rdf-schema#label Evidence: Runtime and memory benchmark results https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate https://w3id.org/np/RAefFjYMSnydcZtTqdT8TG8rJeJa76ryG7h10VHQiWKgY https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate https://w3id.org/np/RAdK5KmqUZAbLUX2IF29UwZHVyZsBj0i8iSy4bzTZxCtI https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/sig http://purl.org/nanopub/x/hasAlgorithm RSA https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/sig http://purl.org/nanopub/x/hasPublicKey MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAq/UT4mEO8sT0Co9F/EBYsf3anJLEeBH0q+JCXbo7FCo+FUXSnic/50bSY5InZoQXt6Qc9QvJgiCe3b/OUr12QqUCQhrofuvRjCusikunl0HFMTLohACpWjtpeq2BY4G/2Vb/EtcgSU7S8SACDt8IEM3UYwFki0HBw1aLbbbVddyIaS7W7dBDye50WuWV6Tt2n4B+fCAwLzLilR44rJom+K93GF2IGH20l83edBVMm7W1xuRwCglHmtu5aM3v3VZfxGoveZEbtMp8LsGFO0IaLOGKi072OocbNZQ08KWNrLLCWwAN79xjb9gKK75AmVcgmQDInqY9P9mBKo85zhxeBwIDAQAB https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/sig http://purl.org/nanopub/x/hasSignature RktuEaxerkNCt3f/rh+P+zpZORq2DX8DgZ0IV5QIcIGXa6/7Mb9iGkvJYFbezq2gzoM41mspOTSJ/V10yGq2HG5aO25/yTtFcUd6RE84v4tyg5TxpDeMi3oJzHfqOVMoiCY0/er7S6crE4/bnnkVY3uGHyjIm6SNg6vYT1qmyZKhTLvYToz1k4GkOmLwCSx2mzGPD2/JK0Mxh42k6EYoOPsrljqjTouxJMy2Awp9X0S9Aeu5m2RhsPBCwI/jCdcbPoJrS1NfUwlY9wgVT9sXpl8p5fA/hSTISkcl3sKNQG6UcVzD6cwtVOGwnpllWCN4AWD9hdAVMOKlutVf1Ad13g== https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/sig http://purl.org/nanopub/x/hasSignatureTarget https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4 https://w3id.org/np/RA6S9HAF--pnx09LJoTJTUBn2MwJ1ENXfBsL3ERA3zOW4/sig http://purl.org/nanopub/x/signedBy https://w3id.org/np/RAuTlT6ESRHfYrofQSuAQtOHeF6BanRUXJc6eY9kEH5UM/zonmw-bot https://w3id.org/np/RAuTlT6ESRHfYrofQSuAQtOHeF6BanRUXJc6eY9kEH5UM/zonmw-bot http://xmlns.com/foaf/0.1/name ZonMw Bot