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"@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/susceptibilityCall", "@type": [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "susceptibility call (ARO antimicrobial phenotype term)" } ], "https://w3id.org/np/o/ntemplate/possibleValue": [ { "@id": "http://purl.obolibrary.org/obo/ARO_3004300" }, { "@id": "http://purl.obolibrary.org/obo/ARO_3004301" }, { "@id": "http://purl.obolibrary.org/obo/ARO_3004302" } ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st11", "@type": [ "https://w3id.org/np/o/ntemplate/GroupedStatement", "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "https://w3id.org/np/o/ntemplate/hasStatement": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st12" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st13" } ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st12", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/micValue" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://example.org/mvikg/micValue" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/phenotype" } ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st13", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/micUnit" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://example.org/mvikg/micUnit" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/phenotype" } ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st16", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/typingMethod" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://example.org/mvikg/typingMethod" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/phenotype" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/typingMethod", "@type": [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder", "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "susceptibility-typing method (ARO term, e.g. disk diffusion, broth microdilution, E-test)" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "https://www.ebi.ac.uk/ols4/api/select?ontology=aro&fieldList=iri,label,description&q=" } ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st17", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/standard" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://example.org/mvikg/breakpointStandard" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/phenotype" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/standard", "@type": [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder", "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "breakpoint/interpretive standard used (ARO term, e.g. CLSI, EUCAST)" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "https://www.ebi.ac.uk/ols4/api/select?ontology=aro&fieldList=iri,label,description&q=" } ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st18", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/platform" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://example.org/mvikg/platform" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/phenotype" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st19", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/comment" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/2000/01/rdf-schema#comment" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/phenotype" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st20", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/spaces/mvikg/r/kg" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/isPartOf" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/phenotype" } ] }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/templateVersion", "http://purl.org/dc/terms/description": [ { "@value": "Declaring a single antibiotic-susceptibility result (MIC/R-S-I call) for an MVIKG sample, independent of any gene or variant. A sample can carry many antibiogram observations. If the paper does tie this result to a specific described variant, that variant can optionally be referenced too." } ], "http://purl.org/dc/terms/isVersionOf": [ { "@id": "https://w3id.org/np/RAG-syFZIrIC-Gf34f_JoDsiBF1tyMzm2boOaL4xjT4nw/template" } ], "@type": [ "https://w3id.org/np/o/ntemplate/AssertionTemplate", "https://w3id.org/np/o/ntemplate/UnlistedTemplate" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Declaring an MVIKG antibiogram observation" } ], "https://w3id.org/kpxl/gen/terms/governedBy": [ { "@id": "https://w3id.org/spaces/mvikg" } ], "https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern": [ { "@value": "antibiogram: ${antibiotic}" } ], "https://w3id.org/np/o/ntemplate/hasStatement": [ { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st01" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st02" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st03" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st04" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st05" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st06" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st07" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st08" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st09" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st10" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st11" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st12" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st13" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st16" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st17" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st18" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st19" }, { "@id": "https://w3id.org/np/RACAUjPZRdEP3h-FGCXTyoy4-0Pt8DpvVknM9pSpBEYcc/st20" } ], "https://w3id.org/np/o/ntemplate/hasTag": [ { "@value": "Biology" } ], "https://w3id.org/np/o/ntemplate/hasTargetNanopubType": [ { "@id": "https://w3id.org/biolink/vocab/PhenotypicFeature" } ] } ] } ]