Nanopublication

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ID

https://w3id.org/np/RAEe--ul1Fk-TqOqyqPvUvfMhCId2wkTVAHUcC-NCrHnU

Formats

.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt

Content

@prefix this: <https://w3id.org/np/RAEe--ul1Fk-TqOqyqPvUvfMhCId2wkTVAHUcC-NCrHnU> .
@prefix sub: <https://w3id.org/np/RAEe--ul1Fk-TqOqyqPvUvfMhCId2wkTVAHUcC-NCrHnU/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix mvikg: <http://example.org/mvikg/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix sosa: <http://www.w3.org/ns/sosa/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <https://w3id.org/np/RAkxom1eVT9niwzMUoJN3GkPVltRbPEGNoBFiCW2oN2i8/variant> a <http://purl.obolibrary.org/obo/SO_0000159>,
      biolink:SequenceVariant;
    mvikg:effect "attenuated colonization of systemic organs in typhoid model";
    mvikg:evidenceText "the DeltasseF mutant was attenuated in systemic organs";
    dct:isPartOf <https://w3id.org/spaces/mvikg/r/kg>;
    rdfs:comment "VAR_003";
    rdfs:label "PMC3149682-Salmonella_enterica_serovar_Typhimurium_DeltasseF-variant1" .
  
  <https://www.ncbi.nlm.nih.gov/gene/1252922> a biolink:Gene;
    sosa:isFeatureOfInterestOf <https://w3id.org/np/RArz-6Skp6_umaK5Y1f4VkmUkc5DeWh9IbZzL4Qa9ZWTY/sample>;
    biolink:has_sequence_variant <https://w3id.org/np/RAkxom1eVT9niwzMUoJN3GkPVltRbPEGNoBFiCW2oN2i8/variant> .
}

sub:provenance {
  sub:assertion prov:wasDerivedFrom <https://w3id.org/mvikg/abox#VARIANT-VAR_003-1252922> .
}

sub:pubinfo {
  this: dct:created "2026-11-10T10:29:01Z"^^xsd:dateTime;
    dct:creator orcid:0009-0005-5515-1230;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:hasNanopubType npx:ExampleNanopub;
    npx:introduces <https://w3id.org/np/RAkxom1eVT9niwzMUoJN3GkPVltRbPEGNoBFiCW2oN2i8/variant>;
    npx:supersedes <https://w3id.org/np/RAkxom1eVT9niwzMUoJN3GkPVltRbPEGNoBFiCW2oN2i8>;
    skos:changeNote "Corrected the nt:wasCreatedFromProvenanceTemplate/PubinfoTemplate links, which previously pointed at the meta-templates used to define templates rather than the actual provenance/pubinfo templates used to create this nanopub. Also stabilized npx:introduces to this record's originally published resource IRI so repeated corrections resolve to one current version instead of appearing as unrelated records.";
    nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RAHKGU7g81YLKWl0S7g0oKdiRD5LhcPFMjVkAgLnipR_g>;
    nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RA-N4_kFxcruvBTlo1yJv29E4SLOXsx5KO_th69PprMrA>,
      <https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8>, <https://w3id.org/np/RAKc76yHLDbloE6ObluzYQsfX37v6qrZXbYeIKpe8-YUo>,
      <https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw>;
    nt:wasCreatedFromTemplate <https://w3id.org/np/RAnlONjGChImRjDeXxTwrTmndhfv1guES7EnXlp1CaE3g/templateVersion> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAjO3oH8Lq/l1oZIUY3FlCz5DnndybGvAhBdmEJ/yq7Nv3GZEYPrEro23rCBCp0GiriOXlVbk61pA/7JFE6tqzTresINW6QQMxE9sIhCBlX4cG66JFD8ud6bMvUyzCR8LQA6zfrSbafGE06rvglJd4MDUcTwvUKqtL9UCnOaowVfnZ3sPOe9EqlmJuO3iHGxBSXMPOPEJZUzMXsFDWFuMZTnrR8gY3r5nVF5a8L/MD135ZH8qW5yGXOB28CmVYCAbw2o07QEKzyzFKN+W1gfnprYZvuKzwGexnzcdzc1S8N/M5bzhWQ40EKCEqgUE8c81OzEMm1HUlUKEJ/o5I/FKKAwIDAQAB";
    npx:hasSignature "GUC6p2By4LFZbl6ohPtg0lDfpaB59ejciuRioqvevZV7kt0Y2pyTekZf16SZz6PQv+9Kue9dP5TPWGTdflcKTGnIP88nY+04r3KDynDHP09llooSzSHlIwL3LbltbrzVk0FEJaEoNzzjQ+VFuaOcy+gRqmIhSuN3hdEN/AJL4j8pDiaIjqBE/oQV6R/X0RJ1e6zqGhrxNWfD7o1kmKznQyJSTOK8sMLTORbQfu3JjQvUdcmVvExSNy9+5bi/FXy1rOHYKIoMIsVv6eQL4pmD9/ls7ftGy3aFGVjmRDFZq/1ObvNhBTGhwi2iqbmA6M5mA6oSzaeaTZtwAxKXyYgOJw==";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0009-0005-5515-1230 .
}