Returns the basic information known about a piece of evidence or an argument as property/value rows: its kind, description, the study that generated it, the publication or dataset documenting it, and who the statement is attributed to. Takes the most recent still-current nanopub about the evidence that was published by somebody holding a role in the project its study belongs to.
Get basic information about a piece of evidence
prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix gen: <https://w3id.org/kpxl/gen/terms/> prefix ff: <https://w3id.org/fair/ff/terms/> prefix obo: <http://purl.obolibrary.org/obo/> prefix cito: <http://purl.org/spar/cito/> prefix prov: <http://www.w3.org/ns/prov#> prefix foaf: <http://xmlns.com/foaf/0.1/> select ?Property_noheader ?Property_label ?Value_multi_val_noheader ?Value_label_multi where { { select ?kind ?kind_label ?description ?study ?study_label (group_concat(distinct str(?source); separator=" ") as ?documented_in_multi_iri) (group_concat(distinct str(?att); separator=" ") as ?att_vals) (group_concat(distinct ?attName; separator=" ") as ?att_labels) where { values ?_evidence_multi_iri {} # the most recent still-current nanopub about this evidence, published by somebody # holding a role in the project the evidence's study belongs to { select ?np where { values ?_evidence_multi_iri {} graph npa:graph { ?np npa:hasValidSignatureForPublicKeyHash ?pk0 ; np:hasAssertion ?a0 ; np:hasPublicationInfo ?pi0 . filter not exists { ?inv0 npx:invalidates ?np ; npa:hasValidSignatureForPublicKeyHash ?pk0 . } filter not exists { ?sup0 npx:supersedes ?np . } } graph ?a0 { ?_evidence_multi_iri a obo:ECO_0000000 ; prov:wasGeneratedBy ?study0 . } graph npa:graph { ?snp0 np:hasAssertion ?sa0 . filter not exists { ?ssup0 npx:supersedes ?snp0 . } } graph ?sa0 { ?study0 a obo:OBI_0000066 ; dct:isPartOf ?project0 . } graph npa:graph { ?mnp0 np:hasAssertion ?ma0 . filter not exists { ?msup0 npx:supersedes ?mnp0 . } } graph ?ma0 { ?project0 ?mrel0 ?member0 . values ?mrel0 { gen:hasAdmin gen:hasProjectLead ff:has-principal-investigator ff:has-participant ff:has-data-steward } } graph ?pi0 { ?np dct:creator ?member0 ; dct:created ?created . } } order by desc(?created) limit 1 } graph npa:graph { ?np np:hasAssertion ?a ; np:hasPublicationInfo ?pi ; np:hasProvenance ?prov . } optional { graph ?a { ?_evidence_multi_iri dct:description ?description } } optional { graph ?a { ?_evidence_multi_iri a ?kind } filter(?kind != obo:ECO_0000000) optional { graph ?pi { ?kind rdfs:label ?kind_label } } } optional { graph ?a { ?_evidence_multi_iri prov:wasGeneratedBy ?study } optional { graph npa:graph { ?snp np:hasAssertion ?sa . filter not exists { ?ssup npx:supersedes ?snp . } } graph ?sa { ?study a obo:OBI_0000066 ; rdfs:label ?study_label . } } } optional { graph ?a { ?_evidence_multi_iri cito:isDocumentedBy ?source } } optional { graph ?prov { ?a prov:wasAttributedTo ?att } optional { graph ?pi { ?att foaf:name ?attName } } } } group by ?kind ?kind_label ?description ?study ?study_label ?np } values (?key ?Property_noheader ?Property_label) { ('Kind' rdf:type 'Kind:') ('Desc' dct:description 'Description:') ('Study' prov:wasGeneratedBy 'Generated by:') ('Src' cito:isDocumentedBy 'Documented by:') ('Att' prov:wasAttributedTo 'Stated by:') } bind(if(?key = 'Kind', str(?kind), if(?key = 'Desc', str(?description), if(?key = 'Study', str(?study), if(?key = 'Src', ?documented_in_multi_iri, ?att_vals)))) as ?rawVal) filter(bound(?rawVal) && ?rawVal != "") bind(?rawVal as ?Value_multi_val_noheader) bind(if(?key = 'Kind', ?kind_label, if(?key = 'Study', ?study_label, if(?key = 'Att', ?att_labels, ""))) as ?Value_label_multi) } order by (if(?key = 'Kind', 1, if(?key = 'Desc', 2, if(?key = 'Study', 3, if(?key = 'Src', 4, 5)))))