Nanopublication

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ID

https://w3id.org/np/RAI2YJKdF_xNgcYlh0L0OEkfgiP0F3EmLV-KxI_xUk2c0

Formats

.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt

Content

@prefix this: <https://w3id.org/np/RAI2YJKdF_xNgcYlh0L0OEkfgiP0F3EmLV-KxI_xUk2c0> .
@prefix sub: <https://w3id.org/np/RAI2YJKdF_xNgcYlh0L0OEkfgiP0F3EmLV-KxI_xUk2c0/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix mvikg: <http://example.org/mvikg/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix sosa: <http://www.w3.org/ns/sosa/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <https://w3id.org/np/RAWjxUHGVbR-zid2Lyk2xaSrbkb-RX9DwblJPvQeR7Kw0/variant> a <http://purl.obolibrary.org/obo/SO_0000159>,
      biolink:SequenceVariant;
    mvikg:effect "downregulation of virulence gene expression and attenuation of virulence";
    mvikg:evidenceText "Deletion of QseC downregulates virulence gene expression and attenuates enterohaemorrhagic and uropathogenic Escherichia coli (EHEC and UPEC), Salmonella typhimurium, and Francisella tularensis";
    dct:isPartOf <https://w3id.org/spaces/mvikg/r/kg>;
    rdfs:comment "VAR_001";
    rdfs:label "PMC3643513-Salmonella_typhimurium-variant1" .
  
  <https://www.uniprot.org/uniprot/Q8ZLZ9> a biolink:Gene;
    sosa:isFeatureOfInterestOf <https://w3id.org/np/RAyuSG9hruJzXYjmFs5nFl-NHyJLKCjbuix2oTKhGWV9M/sample>;
    biolink:has_sequence_variant <https://w3id.org/np/RAWjxUHGVbR-zid2Lyk2xaSrbkb-RX9DwblJPvQeR7Kw0/variant> .
}

sub:provenance {
  sub:assertion prov:wasDerivedFrom <https://w3id.org/mvikg/abox#VARIANT-VAR_001-Q8ZLZ9> .
}

sub:pubinfo {
  this: dct:created "2026-11-10T10:29:01Z"^^xsd:dateTime;
    dct:creator orcid:0009-0005-5515-1230;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:hasNanopubType npx:ExampleNanopub;
    npx:introduces <https://w3id.org/np/RAWjxUHGVbR-zid2Lyk2xaSrbkb-RX9DwblJPvQeR7Kw0/variant>;
    npx:supersedes <https://w3id.org/np/RAWjxUHGVbR-zid2Lyk2xaSrbkb-RX9DwblJPvQeR7Kw0>;
    skos:changeNote "Corrected the nt:wasCreatedFromProvenanceTemplate/PubinfoTemplate links, which previously pointed at the meta-templates used to define templates rather than the actual provenance/pubinfo templates used to create this nanopub. Also stabilized npx:introduces to this record's originally published resource IRI so repeated corrections resolve to one current version instead of appearing as unrelated records.";
    nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RAHKGU7g81YLKWl0S7g0oKdiRD5LhcPFMjVkAgLnipR_g>;
    nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RA-N4_kFxcruvBTlo1yJv29E4SLOXsx5KO_th69PprMrA>,
      <https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8>, <https://w3id.org/np/RAKc76yHLDbloE6ObluzYQsfX37v6qrZXbYeIKpe8-YUo>,
      <https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw>;
    nt:wasCreatedFromTemplate <https://w3id.org/np/RAnlONjGChImRjDeXxTwrTmndhfv1guES7EnXlp1CaE3g/templateVersion> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAjO3oH8Lq/l1oZIUY3FlCz5DnndybGvAhBdmEJ/yq7Nv3GZEYPrEro23rCBCp0GiriOXlVbk61pA/7JFE6tqzTresINW6QQMxE9sIhCBlX4cG66JFD8ud6bMvUyzCR8LQA6zfrSbafGE06rvglJd4MDUcTwvUKqtL9UCnOaowVfnZ3sPOe9EqlmJuO3iHGxBSXMPOPEJZUzMXsFDWFuMZTnrR8gY3r5nVF5a8L/MD135ZH8qW5yGXOB28CmVYCAbw2o07QEKzyzFKN+W1gfnprYZvuKzwGexnzcdzc1S8N/M5bzhWQ40EKCEqgUE8c81OzEMm1HUlUKEJ/o5I/FKKAwIDAQAB";
    npx:hasSignature "PQSF1tAm9+W2SJYanE9TZFl4AweCJaNHPe0U9kMSs2VSNv/vPgAc/jl8bxv9UZiQ9xbn4fmlUAUJ/aS04dyeTYsL4nlpVVvFcG2txAtXBz6maVNSPRRvuxePNrh/811IAqGdwIvwvoFVL+s1PFpnaPqApMU/L9wD92+mA3BrnQ7pBikR4zNtCsbOOfDZTSS5oeuYXyIJDw4zU3aLt8am4pNgVTQkfQJmf57FqH2rxgsUkCp8lh9Hh9vpQVvzAXu9jMfT0z0ZdEdNsxmADzPU6X83hYfN6E5XlxJlG9WhVHMrlgprWNchvnL0Twrp7GyzeeX/Zu3QYXJicMU6xUAclA==";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0009-0005-5515-1230 .
}