https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/Head https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU http://www.nanopub.org/nschema#hasAssertion https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/assertion https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU http://www.nanopub.org/nschema#hasProvenance https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/provenance https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU http://www.nanopub.org/nschema#hasPublicationInfo https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/pubinfo https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.nanopub.org/nschema#Nanopublication https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/assertion http://example.org/mvikg/alt http://www.w3.org/2000/01/rdf-schema#label alternate allele http://example.org/mvikg/comparedTo http://www.w3.org/2000/01/rdf-schema#label compared to http://example.org/mvikg/effect http://www.w3.org/2000/01/rdf-schema#label variant effect http://example.org/mvikg/frequency http://www.w3.org/2000/01/rdf-schema#label frequency http://example.org/mvikg/has_biome http://www.w3.org/2000/01/rdf-schema#label has biome http://example.org/mvikg/length http://www.w3.org/2000/01/rdf-schema#label variant length http://example.org/mvikg/ref http://www.w3.org/2000/01/rdf-schema#label reference allele http://purl.obolibrary.org/obo/ECO_0000305 http://www.w3.org/2000/01/rdf-schema#label evidence http://purl.org/dc/dcmitype/Dataset http://www.w3.org/2000/01/rdf-schema#label dataset http://purl.org/dc/terms/description http://www.w3.org/2000/01/rdf-schema#label description http://purl.org/dc/terms/isPartOf http://www.w3.org/2000/01/rdf-schema#label is part of http://qudt.org/schema/qudt/QuantityValue http://www.w3.org/2000/01/rdf-schema#label quantity value http://qudt.org/schema/qudt/hasUnit http://www.w3.org/2000/01/rdf-schema#label unit http://qudt.org/schema/qudt/numericValue http://www.w3.org/2000/01/rdf-schema#label numeric value http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/2000/01/rdf-schema#label is a http://www.w3.org/2000/01/rdf-schema#label http://www.w3.org/2000/01/rdf-schema#label label http://www.w3.org/ns/sosa/isFeatureOfInterestOf http://www.w3.org/2000/01/rdf-schema#label is feature of interest of http://www.w3.org/ns/sosa/isSampleOf http://www.w3.org/2000/01/rdf-schema#label is sample of https://w3id.org/biolink/vocab/Gene http://www.w3.org/2000/01/rdf-schema#label gene https://w3id.org/biolink/vocab/PhenotypicFeature http://www.w3.org/2000/01/rdf-schema#label phenotypic feature https://w3id.org/biolink/vocab/SequenceVariant http://www.w3.org/2000/01/rdf-schema#label sequence variant https://w3id.org/biolink/vocab/end_coordinate http://www.w3.org/2000/01/rdf-schema#label end coordinate https://w3id.org/biolink/vocab/has_evidence http://www.w3.org/2000/01/rdf-schema#label has evidence https://w3id.org/biolink/vocab/has_phenotype http://www.w3.org/2000/01/rdf-schema#label has phenotype https://w3id.org/biolink/vocab/has_sequence_variant http://www.w3.org/2000/01/rdf-schema#label has sequence variant https://w3id.org/biolink/vocab/in_taxon http://www.w3.org/2000/01/rdf-schema#label in taxon https://w3id.org/biolink/vocab/start_coordinate http://www.w3.org/2000/01/rdf-schema#label start coordinate https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/alt http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LiteralPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/alt http://www.w3.org/2000/01/rdf-schema#label alternate allele https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/biome http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/biome http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/biome http://www.w3.org/2000/01/rdf-schema#label the biome the taxon was sampled from (GOLD biome recommended) https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/biome https://w3id.org/np/o/ntemplate/possibleValuesFromApi https://www.ebi.ac.uk/ols4/api/select?ontology=gold&fieldList=iri,label,description&q= https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/comparedTo http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LiteralPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/comparedTo http://www.w3.org/2000/01/rdf-schema#label compared to (the baseline/control the phenotype outcome was compared against) https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/effect http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LiteralPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/effect http://www.w3.org/2000/01/rdf-schema#label variant effect https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/endCoordinate http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LiteralPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/endCoordinate http://www.w3.org/2000/01/rdf-schema#label end coordinate (variant position) https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/endCoordinate https://w3id.org/np/o/ntemplate/hasDatatype http://www.w3.org/2001/XMLSchema#integer https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/evidence http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/EmbeddedResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/evidence http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LocalResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/evidence http://www.w3.org/2000/01/rdf-schema#label evidence for this variant https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/evidenceText http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LiteralPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/evidenceText http://www.w3.org/2000/01/rdf-schema#label evidence text (quote/description from the source) https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freq http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/EmbeddedResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freq http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LocalResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freq http://www.w3.org/2000/01/rdf-schema#label the variant's frequency https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freqUnit http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freqUnit http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freqUnit http://www.w3.org/2000/01/rdf-schema#label frequency unit https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freqUnit https://w3id.org/np/o/ntemplate/possibleValue http://qudt.org/vocab/unit/PERCENT https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freqUnit https://w3id.org/np/o/ntemplate/possibleValue http://qudt.org/vocab/unit/UNITLESS https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freqValue http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LiteralPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freqValue http://www.w3.org/2000/01/rdf-schema#label frequency value https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/freqValue https://w3id.org/np/o/ntemplate/hasDatatype http://www.w3.org/2001/XMLSchema#decimal https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/gene http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/AgentPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/gene http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/gene http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/gene http://www.w3.org/2000/01/rdf-schema#label the gene this variant and (optionally) phenotype belong to https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/gene https://w3id.org/np/o/ntemplate/possibleValuesFromApi https://w3id.org/np/l/nanopub-query-1.1/api/RAom4OoQ8U2K6A629YRXKo9-XU-ZJM7-KZs1h11OD6c1w/find-things?type=https://w3id.org/biolink/vocab/Gene https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/length http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LiteralPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/length http://www.w3.org/2000/01/rdf-schema#label variant length (free text — not all source rows give a clean integer) https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/organism http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/EmbeddedResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/organism http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LocalResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/organism http://www.w3.org/2000/01/rdf-schema#label the strain/organism this sample was taken from https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/phenotype http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/EmbeddedResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/phenotype http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LocalResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/phenotype http://www.w3.org/2000/01/rdf-schema#label the phenotype associated with this gene https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/phenotypeDescription http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LiteralPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/phenotypeDescription http://www.w3.org/2000/01/rdf-schema#label phenotype description (prose, e.g. "DeltarfaH mutant elicited ROS production...") https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/project http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/project http://www.w3.org/2000/01/rdf-schema#label the PMC article/dataset this record is derived from (PMC URI, e.g. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3079231/) https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/ref http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LiteralPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/ref http://www.w3.org/2000/01/rdf-schema#label reference allele https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/sample http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/EmbeddedResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/sample http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/LocalResource https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/sample http://www.w3.org/2000/01/rdf-schema#label the sample this gene was observed in https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/soType http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/soType http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/soType http://www.w3.org/2000/01/rdf-schema#label sequence variant type (Sequence Ontology) https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/soType https://w3id.org/np/o/ntemplate/possibleValuesFromApi https://www.ebi.ac.uk/ols4/api/select?ontology=so&fieldList=iri,label,description&q= https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/st01 http://www.w3.org/1999/02/22-rdf-syntax-ns#object https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/sample https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/st01 http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate http://www.w3.org/ns/sosa/isFeatureOfInterestOf https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/st01 http://www.w3.org/1999/02/22-rdf-syntax-ns#subject https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/gene https://w3id.org/np/RALRRzcTp2-0bwxqsE6K3G_NZVZ_QO529mQ7O236SUWaU/st02 http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/np/o/ntemplate/GroupedStatement 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