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ID

https://w3id.org/np/RAN8Oub5B3_YnbXHs8yOycVtHeuePVasJPJHkXgq7HgmI

Formats

.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt

Content

@prefix this: <https://w3id.org/np/RAN8Oub5B3_YnbXHs8yOycVtHeuePVasJPJHkXgq7HgmI> .
@prefix sub: <https://w3id.org/np/RAN8Oub5B3_YnbXHs8yOycVtHeuePVasJPJHkXgq7HgmI/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix orcid: <https://orcid.org/> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix gen: <https://w3id.org/kpxl/gen/terms/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <http://purl.jp/bio/10/mpo#MPO_10004> rdfs:label "is confirmed to grow at pH" .
  
  <http://purl.jp/bio/10/mpo#MPO_10008> rdfs:label "is confirmed to grow at temperature (°C)" .
  
  <http://purl.obolibrary.org/obo/OMP_0000188> rdfs:label "Gram-positive" .
  
  <http://purl.obolibrary.org/obo/OMP_0000189> rdfs:label "Gram-negative" .
  
  <http://purl.obolibrary.org/obo/RO_0000087> rdfs:label "has ecological role" .
  
  <http://purl.obolibrary.org/obo/RO_0002200> rdfs:label "has phenotype" .
  
  <http://purl.obolibrary.org/obo/RO_0002215> rdfs:label "has enzymatic activity" .
  
  <http://purl.obolibrary.org/obo/RO_0002556> rdfs:label "is pathogen of" .
  
  dct:identifier rdfs:label "has 16S rRNA accession (GenBank)" .
  
  <http://purl.org/spar/cito/isDescribedBy> rdfs:label "is described in publication (DOI)" .
  
  <http://rs.tdwg.org/dwc/iri/identifiedBy> rdfs:label "is identified by" .
  
  <http://rs.tdwg.org/dwc/iri/inCollection> rdfs:label "is available in collection" .
  
  rdf:type rdfs:label "is an instance of" .
  
  rdfs:label rdfs:label "has label" .
  
  prov:wasAttributedTo rdfs:label "is isolated by" .
  
  prov:wasDerivedFrom rdfs:label "is derived from sample" .
  
  <http://www.wikidata.org/prop/direct/P4333> rdfs:label "has genome assembly accession" .
  
  <https://schema.org/contactPoint> rdfs:label "has contact person" .
  
  <https://w3id.org/kpxl/biodiv/terms/hasTaxonName> rdfs:label "belongs to taxon" .
  
  <https://w3id.org/mixs/0000015> rdfs:label "has oxygen requirement" .
  
  <https://w3id.org/mixs/0000016> rdfs:label "has processing history" .
  
  <https://w3id.org/mixs/0000110> rdfs:label "has storage temperature (°C)" .
  
  <https://w3id.org/mixs/0001216> rdfs:label "grows on medium" .
  
  <https://w3id.org/mixs/RelToOxygenEnum#aerobe> rdfs:label "aerobe" .
  
  <https://w3id.org/mixs/RelToOxygenEnum#anaerobe> rdfs:label "anaerobe" .
  
  <https://w3id.org/mixs/RelToOxygenEnum#microaerophilic> rdfs:label "microaerophilic" .
  
  sub:accessionID a nt:LiteralPlaceholder .
  
  sub:antibioticResistance a nt:GuidedChoicePlaceholder;
    nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=aro&q=" .
  
  sub:collection a nt:ExternalUriPlaceholder .
  
  sub:contactPerson a nt:AgentPlaceholder .
  
  sub:ecologicalRole a nt:GuidedChoicePlaceholder;
    nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=chebi&q=" .
  
  sub:enzymeActivity a nt:GuidedChoicePlaceholder;
    nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=go&q=" .
  
  sub:genomeAccession a nt:LiteralPlaceholder .
  
  sub:gramStain a nt:RestrictedChoicePlaceholder;
    nt:possibleValue <http://purl.obolibrary.org/obo/OMP_0000188>, <http://purl.obolibrary.org/obo/OMP_0000189> .
  
  sub:group10 a nt:GroupedStatement;
    nt:hasStatement sub:st10, sub:st11, sub:st12 .
  
  sub:host a nt:GuidedChoicePlaceholder;
    nt:possibleValuesFromApi "https://api.catalogueoflife.org/dataset/3LR/nameusage/search?q=" .
  
  sub:identifier a nt:AgentPlaceholder .
  
  sub:isolator a nt:AgentPlaceholder .
  
  sub:label a nt:LiteralPlaceholder .
  
  sub:medium a nt:LiteralPlaceholder .
  
  sub:microorganism a nt:IntroducedResource, nt:LocalResource .
  
  sub:optimalPH a nt:LiteralPlaceholder .
  
  sub:optimalTemperature a nt:LiteralPlaceholder .
  
  sub:oxygenRequirement a nt:RestrictedChoicePlaceholder;
    nt:possibleValue <https://w3id.org/mixs/RelToOxygenEnum#aerobe>, <https://w3id.org/mixs/RelToOxygenEnum#anaerobe>,
      <https://w3id.org/mixs/RelToOxygenEnum#microaerophilic> .
  
  sub:processingHistory a nt:LongLiteralPlaceholder .
  
  sub:publication a nt:ExternalUriPlaceholder .
  
  sub:sampleSource a nt:ExternalUriPlaceholder .
  
  sub:st10 rdf:object <https://w3id.org/spaces/biodiversity/r/ontology/Microorganism>;
    rdf:predicate rdf:type;
    rdf:subject sub:microorganism .
  
  sub:st11 rdf:object sub:taxon;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonName>;
    rdf:subject sub:microorganism .
  
  sub:st12 rdf:object sub:label;
    rdf:predicate rdfs:label;
    rdf:subject sub:microorganism .
  
  sub:st13 a nt:OptionalStatement;
    rdf:object sub:isolator;
    rdf:predicate prov:wasAttributedTo;
    rdf:subject sub:microorganism .
  
  sub:st14 a nt:OptionalStatement;
    rdf:object sub:contactPerson;
    rdf:predicate <https://schema.org/contactPoint>;
    rdf:subject sub:microorganism .
  
  sub:st15 a nt:OptionalStatement;
    rdf:object sub:gramStain;
    rdf:predicate <http://purl.obolibrary.org/obo/RO_0002200>;
    rdf:subject sub:microorganism .
  
  sub:st16 a nt:OptionalStatement;
    rdf:object sub:oxygenRequirement;
    rdf:predicate <https://w3id.org/mixs/0000015>;
    rdf:subject sub:microorganism .
  
  sub:st17 a nt:OptionalStatement;
    rdf:object sub:storageTemperature;
    rdf:predicate <https://w3id.org/mixs/0000110>;
    rdf:subject sub:microorganism .
  
  sub:st18 a nt:OptionalStatement, nt:RepeatableStatement;
    rdf:object sub:optimalTemperature;
    rdf:predicate <http://purl.jp/bio/10/mpo#MPO_10008>;
    rdf:subject sub:microorganism .
  
  sub:st19 a nt:OptionalStatement, nt:RepeatableStatement;
    rdf:object sub:optimalPH;
    rdf:predicate <http://purl.jp/bio/10/mpo#MPO_10004>;
    rdf:subject sub:microorganism .
  
  sub:st20 a nt:OptionalStatement, nt:RepeatableStatement;
    rdf:object sub:medium;
    rdf:predicate <https://w3id.org/mixs/0001216>;
    rdf:subject sub:microorganism .
  
  sub:st21 rdf:object sub:processingHistory;
    rdf:predicate <https://w3id.org/mixs/0000016>;
    rdf:subject sub:microorganism .
  
  sub:st22 rdf:object sub:accessionID;
    rdf:predicate dct:identifier;
    rdf:subject sub:microorganism .
  
  sub:st23 rdf:object sub:genomeAccession;
    rdf:predicate <http://www.wikidata.org/prop/direct/P4333>;
    rdf:subject sub:microorganism .
  
  sub:st24 rdf:object sub:collection;
    rdf:predicate <http://rs.tdwg.org/dwc/iri/inCollection>;
    rdf:subject sub:microorganism .
  
  sub:st25 rdf:object sub:publication;
    rdf:predicate <http://purl.org/spar/cito/isDescribedBy>;
    rdf:subject sub:microorganism .
  
  sub:st26 rdf:object sub:enzymeActivity;
    rdf:predicate <http://purl.obolibrary.org/obo/RO_0002215>;
    rdf:subject sub:microorganism .
  
  sub:st27 rdf:object sub:antibioticResistance;
    rdf:predicate <http://purl.obolibrary.org/obo/RO_0002200>;
    rdf:subject sub:microorganism .
  
  sub:st28 rdf:object sub:host;
    rdf:predicate <http://purl.obolibrary.org/obo/RO_0002556>;
    rdf:subject sub:microorganism .
  
  sub:st29 rdf:object sub:ecologicalRole;
    rdf:predicate <http://purl.obolibrary.org/obo/RO_0000087>;
    rdf:subject sub:microorganism .
  
  sub:st30 a nt:OptionalStatement;
    rdf:object sub:sampleSource;
    rdf:predicate prov:wasDerivedFrom;
    rdf:subject sub:microorganism .
  
  sub:st31 rdf:object sub:identifier;
    rdf:predicate <http://rs.tdwg.org/dwc/iri/identifiedBy>;
    rdf:subject sub:microorganism .
  
  sub:storageTemperature a nt:LiteralPlaceholder .
  
  sub:taxon a nt:GuidedChoicePlaceholder;
    nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=ncbitaxon&q=" .
  
  sub:template a nt:AssertionTemplate, nt:UnlistedTemplate;
    dct:description "Allows to describe a microorganism isolated from an environmental or organic sample.";
    dct:isVersionOf <https://w3id.org/np/RAyqTyJN6BBXFVOArX3TyxHKjMXXLQ5UKTfFUEfUbfd-M/templateKind>;
    rdfs:label "Describing a microorganism";
    gen:governedBy <https://w3id.org/spaces/zdouclab>;
    nt:hasStatement sub:group10, sub:st10, sub:st11, sub:st12, sub:st13, sub:st14, sub:st15,
      sub:st16, sub:st17, sub:st18, sub:st19, sub:st20, sub:st21, sub:st22, sub:st23, sub:st24,
      sub:st25, sub:st26, sub:st27, sub:st28, sub:st29, sub:st30, sub:st31;
    nt:hasTag "naturalProducts" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo orcid:0000-0001-6534-6609 .
}

sub:pubinfo {
  orcid:0009-0008-9871-6504 foaf:name "Tanja Gesslbauer" .
  
  this: dct:created "2026-11-04T07:01:12.690Z"^^xsd:dateTime;
    dct:creator orcid:0009-0008-9871-6504;
    dct:license <https://creativecommons.org/publicdomain/zero/1.0/>;
    npx:embeds sub:template;
    npx:introduces <https://w3id.org/np/RAyqTyJN6BBXFVOArX3TyxHKjMXXLQ5UKTfFUEfUbfd-M/templateKind>;
    npx:supersedes <https://w3id.org/np/RAyB7paQa0qLh50zAx--SGLA47f0wLQeyevxu11CvlpsE>;
    npx:wasCreatedAt <https://nanodash.knowledgepixels.com/>;
    rdfs:label "Describing a microorganism";
    skos:changeNote "added \"identified by\"";
    nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU>;
    nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8>,
      <https://w3id.org/np/RAKc76yHLDbloE6ObluzYQsfX37v6qrZXbYeIKpe8-YUo>, <https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw>,
      <https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI>;
    nt:wasCreatedFromTemplate <https://w3id.org/np/RAgeON_vGgJCt5E4DPMi0eOPaGwNv9tbfFTRZtBwdQL0w/templateVersion> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEA02y93vFEAcWMFzbjCOCcrlPWaGl07plaXnSH0AXWipcRv4YCsGxl14yKnifk08+Aq73oCj74FmgJbn5wDOLxyqLMfxmTEPDllEMDtM54qOUFE5ic8SubIGke/a2G6p+ud3N/u4Ca+9jSnknuzEK++xXxq2sCgqagmUQNql+Qev3vlCphclSfHmcwjh+coHq/CP69nZ2mMtocI59VQ6A5zAPgnseRkVFCseeunKtNPZ4myL0Q0bv+Jh2bRz7feilwsI4Dq0SnLWYa3xGnZME3yOZNs/RhicGECa9jk7+S0WW2ddJnpelMlDxRZBRY+Riv1uDAj+HrfrHEtKFMxP4kSwIDAQAB";
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    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0009-0008-9871-6504 .
  
  <https://w3id.org/spaces/zdouclab> nt:hasLabelFromApi "ZdoucLab - Describes the activities of the ZdoucLab group at the University of Vienna." .
}