https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/Head https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s http://www.nanopub.org/nschema#hasAssertion https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/assertion https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s http://www.nanopub.org/nschema#hasProvenance https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/provenance https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s http://www.nanopub.org/nschema#hasPublicationInfo https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/pubinfo https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.nanopub.org/nschema#Nanopublication https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/assertion https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/get-fixed-classes-of-an-ontology-version http://purl.org/dc/terms/description Returns the fixed set of classes (owl:Class) of the given ontology version. The ontology version (an IRI typed gen:OntologyVersion, e.g. https://w3id.org/spaces/biochementity/r/vocabulary/version/0.0.2) is resolved to its non-invalidated introducing nanopublication, whose assertion points via gen:hasContentIndex to a nanopublication index; the returned classes are the ones introduced by the nanopublications listed as npx:includesElement of that index. One level of npx:appendsIndex / npx:includesSubindex is followed, so chained or split indexes of up to about two thousand elements are covered; deeper chains would need a query update. Because a released version pins exact nanopublication versions, the listed class nanopublications are shown exactly as pinned: no invalidation filtering, no latest-version resolution, no approval logic, and no member gating is applied, so classes stay listed even if their definition has since been superseded or retracted, and all displayed information (labels, definitions, superclasses, status) comes from the pinned versions. Superclass labels are taken from the superclass' own rdfs:label when its defining nanopublication is part of the same version's index; otherwise the IRI is shown. The status column is a multi-value literal listing the curation states of the pinned definition: "deprecated" (owl:DeprecatedClass), "withdrawn" (gen:WithdrawnTerm) and "example" (npx:ExampleNanopub), in that order. The last_modified_by/last_modified columns give the signer and timestamp of the pinned definition; the signer name is resolved from the trust repo (/repo/trust) or left blank. Companion of 'Get the approved classes of an ontology from space members', which shows the live (latest, approved) classes of the ontology itself; this query runs on /repo/full because ontology-version and index nanopublications do not carry the owl:Class type. https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/get-fixed-classes-of-an-ontology-version http://purl.org/dc/terms/license http://www.apache.org/licenses/LICENSE-2.0 https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/get-fixed-classes-of-an-ontology-version http://www.w3.org/1999/02/22-rdf-syntax-ns#type https://w3id.org/kpxl/grlc/grlc-query https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/get-fixed-classes-of-an-ontology-version http://www.w3.org/2000/01/rdf-schema#label Get the fixed classes of an ontology version https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/get-fixed-classes-of-an-ontology-version https://w3id.org/kpxl/grlc/endpoint https://w3id.org/np/l/nanopub-query-1.1/repo/full https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/get-fixed-classes-of-an-ontology-version https://w3id.org/kpxl/grlc/sparql prefix owl: <http://www.w3.org/2002/07/owl#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix skos: <http://www.w3.org/2004/02/skos/core#> prefix gen: <https://w3id.org/kpxl/gen/terms/> prefix foaf: <http://xmlns.com/foaf/0.1/> select ?class ?class_label ?description ?superclasses_multi_iri ?superclasses_label_multi ?status_multi ?last_modified_by (sample(?lmbl) as ?last_modified_by_label) ?last_modified ?np ?np_label where { { select ?class ?class_label (?definition as ?description) (group_concat(distinct str(?superclass); separator=" ") as ?superclasses_multi_iri) (group_concat(distinct replace(replace(coalesce(?superclass_lbl, str(?superclass)), "\\\\", "\\\\\\\\"), "[\r\n]+", "\\\\n"); separator="\n") as ?superclasses_label_multi) ?status_multi (sample(?user) as ?last_modified_by) (sample(?date) as ?last_modified) ?np ("^" as ?np_label) where { graph npa:graph { ?vnp npx:introduces ?_ontologyversion_iri . filter not exists { ?vinv npx:invalidates ?vnp . } ?vnp np:hasAssertion ?vA . } graph ?vA { ?_ontologyversion_iri gen:hasContentIndex ?contentIndex . } graph npa:graph { ?contentIndex np:hasAssertion ?ciA . } { graph ?ciA { ?contentIndex npx:includesElement ?np . } } union { graph ?ciA { ?contentIndex npx:appendsIndex|npx:includesSubindex ?subIndex . } graph npa:graph { ?subIndex np:hasAssertion ?siA . } graph ?siA { ?subIndex npx:includesElement ?np . } } graph npa:graph { ?np dct:created ?date . ?np npx:introduces ?class . ?np np:hasAssertion ?a . optional { ?np npx:signedBy ?user . } } graph ?a { ?class a owl:Class . optional { ?class rdfs:label ?class_label . filter(lang(?class_label) = "") } optional { ?class skos:definition ?definition . } optional { ?class rdfs:subClassOf ?superclass . filter(isIRI(?superclass)) } } bind(replace(concat( if(exists { graph ?a { ?class a owl:DeprecatedClass } }, "deprecated\n", ""), if(exists { graph ?a { ?class a gen:WithdrawnTerm } }, "withdrawn\n", ""), if(exists { graph npa:graph { ?np npx:hasNanopubType npx:ExampleNanopub } }, "example\n", "") ), "\n$", "") as ?status_multi) optional { select ?superclass (sample(?sclbl) as ?superclass_lbl) where { graph npa:graph { ?svnp npx:introduces ?_ontologyversion_iri . filter not exists { ?svinv npx:invalidates ?svnp . } ?svnp np:hasAssertion ?svA . } graph ?svA { ?_ontologyversion_iri gen:hasContentIndex ?sci . } graph npa:graph { ?sci np:hasAssertion ?sciA . } { graph ?sciA { ?sci npx:includesElement ?scnp . } } union { graph ?sciA { ?sci npx:appendsIndex|npx:includesSubindex ?ssubIndex . } graph npa:graph { ?ssubIndex np:hasAssertion ?ssiA . } graph ?ssiA { ?ssubIndex npx:includesElement ?scnp . } } graph npa:graph { ?scnp npx:introduces ?superclass ; np:hasAssertion ?sca . } graph ?sca { ?superclass rdfs:label ?sclbl . filter(lang(?sclbl) = "") } } group by ?superclass } } group by ?class ?class_label ?definition ?status_multi ?np } optional { service <https://w3id.org/np/l/nanopub-query-1.1/repo/trust> { select ?last_modified_by ?lmbl where { graph npa:graph { npa:thisRepo npa:hasCurrentTrustState ?tg . } graph ?tg { ?last_modified_by foaf:name ?lmbl . } } } } } group by ?class ?class_label ?description ?superclasses_multi_iri ?superclasses_label_multi ?status_multi ?last_modified_by ?last_modified ?np ?np_label order by ?class_label https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/provenance https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0002-1267-0234 https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/pubinfo https://orcid.org/0000-0002-1267-0234 http://xmlns.com/foaf/0.1/name Tobias Kuhn https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s http://purl.org/dc/terms/created 2026-08-19T06:59:06Z https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s http://purl.org/dc/terms/creator https://orcid.org/0000-0002-1267-0234 https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s http://purl.org/dc/terms/license https://creativecommons.org/publicdomain/zero/1.0/ https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s http://purl.org/nanopub/x/embeds https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/get-fixed-classes-of-an-ontology-version https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s http://www.w3.org/2000/01/rdf-schema#label Get the fixed classes of an ontology version https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8 https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate https://w3id.org/np/RAEFAt-QcFK0ZhqfvlsmS10BnzGJA0xwOICZXkO-ai87k https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/sig http://purl.org/nanopub/x/hasAlgorithm RSA https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/sig http://purl.org/nanopub/x/hasPublicKey MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCwUtewGCpT5vIfXYE1bmf/Uqu1ojqnWdYxv+ySO80ul8Gu7m8KoyPAwuvaPj0lvPtHrg000qMmkxzKhYknEjq8v7EerxZNYp5B3/3+5ZpuWOYAs78UnQVjbHSmDdmryr4D4VvvNIiUmd0yxci47dTFUj4DvfHnGd6hVe5+goqdcwIDAQAB https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/sig http://purl.org/nanopub/x/hasSignature hPoNsBeqF38FB6BQRunDM2MLRv8Fnluxw2axfNm/7sp2AyUyA7iWAotnEkX5piig103b98qcGKXgBdnso+Q5sFiNH4bibtsn1uLH0yLfWSu+WuqZq40hz/LY/qxSEe02nYs1xoppAro4PNEf9T8d+IZB9q+MhnugdKBNHjTSjf8= https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/sig http://purl.org/nanopub/x/hasSignatureTarget https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s https://w3id.org/np/RAZrDAgeCAfr2NISB7P7soYoCGoJWE98OzlcfkjBTpE7s/sig http://purl.org/nanopub/x/signedBy https://orcid.org/0000-0002-1267-0234