rows { options { physical_type: PHYSICAL_STREAM_TYPE_QUADS max_name_table_size: 128 max_prefix_table_size: 16 max_datatype_table_size: 16 logical_type: LOGICAL_STREAM_TYPE_DATASETS version: 2 } } rows { prefix { value: "https://w3id.org/sciencelive/np/" } } rows { name { value: "RAa4QR41Hot9zxujcrCyTo82Ij7oaw_6z8zk8NxDqoJFM" } } rows { namespace { name: "this" value { prefix_id: 1 } } } rows { prefix { value: "https://w3id.org/sciencelive/np/RAa4QR41Hot9zxujcrCyTo82Ij7oaw_6z8zk8NxDqoJFM/" } } rows { name { } } rows { namespace { name: "sub" value { prefix_id: 2 } } } rows { prefix { value: "http://www.nanopub.org/nschema#" } } rows { namespace { name: "np" value { prefix_id: 3 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/1999/02/22-rdf-syntax-ns#" } } rows { namespace { name: "rdf" value { prefix_id: 4 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/ns/prov#" } } rows { namespace { name: "prov" value { prefix_id: 5 name_id: 2 } } } rows { prefix { value: "http://purl.org/nanopub/x/" } } rows { namespace { name: "npx" value { prefix_id: 6 name_id: 2 } } } rows { prefix { value: "http://purl.org/dc/terms/" } } rows { namespace { name: "dc" value { prefix_id: 7 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/2001/XMLSchema#" } } rows { namespace { name: "xsd" value { prefix_id: 8 name_id: 2 } } } rows { name { value: "hasAssertion" } } rows { name { value: "assertion" } } rows { name { value: "Head" } } rows { quad { s_iri { prefix_id: 1 name_id: 1 } p_iri { prefix_id: 3 name_id: 3 } o_iri { prefix_id: 2 } g_iri { } } } rows { name { value: "hasProvenance" } } rows { name { value: "provenance" } } rows { quad { p_iri { prefix_id: 3 } o_iri { prefix_id: 2 } } } rows { name { value: "hasPublicationInfo" } } rows { name { value: "pubinfo" } } rows { quad { p_iri { prefix_id: 3 } o_iri { prefix_id: 2 } } } rows { name { value: "type" } } rows { name { value: "Nanopublication" } } rows { quad { p_iri { prefix_id: 4 } o_iri { prefix_id: 3 } } } rows { name { value: "soroye2020-iberian-bombus-substrate-extension-nside128-validated" } } rows { prefix { value: "http://schema.org/" } } rows { name { value: "endDate" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#date" } } rows { quad { s_iri { prefix_id: 2 } p_iri { prefix_id: 9 } o_literal { lex: "2026-05-09" datatype: 1 } g_iri { prefix_id: 2 name_id: 4 } } } rows { prefix { value: "https://w3id.org/sciencelive/o/terms/" } } rows { name { value: "FORRT-Replication-Outcome" } } rows { quad { p_iri { prefix_id: 4 name_id: 10 } o_iri { prefix_id: 10 name_id: 14 } } } rows { prefix { value: "http://www.w3.org/2000/01/rdf-schema#" } } rows { name { value: "label" } } rows { quad { p_iri { prefix_id: 11 } o_literal { lex: "TEI-based extirpation mechanism: HEALPix nside=128 substrate extension on Iberian Bombus (full GLMM refit; SSP3-7.0 projection)" } } } rows { name { value: "hasConclusionDescription" } } rows { quad { p_iri { prefix_id: 10 } o_literal { lex: "This repository extends the canonical Iberian Bombus replication (weatherxbiodiversity-projection at HEALPix nside=64) by refitting Soroye et al.\'s (2020) GLMM at HEALPix nside=128 \342\200\224 the native pixelisation of DestinE Climate DT IFS-NEMO standard, with cells ~46 km across (4\303\227 finer than the canonical sibling).\n\nThe headline GLMM coefficient on standardised TEI_delta at nside=128 is +0.347 (95% HDI [+0.139, +0.533]) \342\200\224 positive, large, credibly above zero. Compared with the canonical CEA fit (+0.479) and the nside=64 sibling (+0.454), all three estimates are within \302\26130 percent, sign-aligned, and order-of-magnitude consistent. Soroye\'s central biological claim \342\200\224 that thermal-niche exceedance increases extirpation probability \342\200\224 replicates at three independent spatial substrates spanning ~46\342\200\223100 km cell resolution.\n\nThe Tier-2 SSP3-7.0 projection (DestinE Climate DT, 2020\342\200\2232029 + 2030\342\200\2232039 horizons) at substrate-matched nside=128 shows the same drift-toward-niche-edge pattern as the nside=64 sibling: mean future TEI rises systematically across most species, but no species crosses TEI > 1 (Soroye\'s actual extirpation threshold) at any currently-occupied cell over the next 15 years. The 2030\342\200\2232039 horizon is the early-warning period under SSP3-7.0, not the extirpation period itself.\n\nPer-species ranking at this substrate is reported via the protocol established in the methodological sibling repo weatherxbiodiversity-substrate-sensitivity: filter to species with at least 10 occupied cells AND use main-effects-only \316\267 at projection time. At this filter, the cross-substrate Spearman correlation with the nside=64 sibling is +0.97 (mid-term horizon) \342\200\224 the per-species ranking IS substrate-stable for species above the cell-count threshold. The substrate-stable highest-risk Iberian species at nside=128 are B. humilis, B. muscorum, B. ruderarius (matching the nside=64 sibling\'s top 3); the lowest-risk are B. terrestris, B. pascuorum, B. pratorum." } } } rows { name { value: "hasConfidenceLevel" } } rows { name { value: "HighConfidence" } } rows { quad { p_iri { } o_iri { } } } rows { name { value: "hasEvidenceDescription" } } rows { quad { p_iri { } o_literal { lex: "TIER 1 \342\200\224 historical fit at HEALPix nside=128 (1901\342\200\2232014 CRU TS 3.24.01 from Soroye Figshare; GBIF Iberian Bombus occurrences via own download DOI; full GLMM refit at native nside=128).\n\nGLMM headline coefficient sc_TEI_delta:\n - HEALPix nside=128 (~46 km, this run): +0.347 (95% HDI [+0.139, +0.533])\n - HEALPix nside=64 (~92 km, sibling): +0.454 (95% HDI [+0.130, +0.751])\n - CEA (~100 km, canonical): +0.479\n All three within \302\26130 percent. Sign, magnitude, and HDI mutually consistent.\n\nVerdict: substrate-robust across the three pixelisations.\n\nCross-fit sanity check at nside=128: variational-Bayes via statsmodels BinomialBayesMixedGLM reports +0.347 \302\261 0.079 (VB SD), consistent with the bambi/PyMC NUTS posterior to within VB-underestimation noise. See results/headline_statistic_healpix.json.\n\nTIER 2 \342\200\224 SSP3-7.0 projection at substrate-matched nside=128 (DestinE Climate DT, IFS-NEMO standard, native HEALPix nside=128, 2020\342\200\2232029 + 2030\342\200\2232039 horizons; no parent-aggregation deviation between fit and projection grids).\n\nMean future TEI per species, 2030\342\200\2232039 horizon (substrate-invariant physical metric, \317\201_Spearman vs nside=64 sibling = +0.66 at n\342\211\2451, +0.90 at n\342\211\24510):\n - Most-shifted species (top of ranking): B. humilis, B. muscorum, B. ruderarius\n - Least-shifted (bottom of ranking): B. terrestris, B. pascuorum, B. pratorum\n - Same top-3 / bottom-3 as the nside=64 sibling\'s substrate-stable ranking.\n\nPer-species community-mean \316\267 under SSP3-7.0 (filtered to n_cells\342\211\24510 at both substrates, main-effects-only \316\267 \342\200\224 \317\201_Spearman vs nside=64 = +0.97 mid-term, +0.96 near-term).\n\nFraction of currently-occupied cells where future TEI exceeds 1.0 at 2030\342\200\2232039: 0.00 for every studied species at nside=128 \342\200\224 same as the nside=64 sibling. The TEI > 1 threshold is not crossed under SSP3-7.0 over the next 15 years on Iberia.\n\nFiles: results/headline_statistic_healpix.json (Tier 1), results/projection_headline.json (Tier 2 per-species rank), results/posterior_bambi_healpix.nc (full nside=128 posterior); figures figures/main_result_healpix.png + figures/projection_summary.png.\n\nCross-substrate diagnostic: see weatherxbiodiversity-substrate-sensitivity (DOI to be minted) for the full five-variant Spearman concordance table, per-species \316\267 decomposition, and recommended reporting protocol.\n\nGitHub repository: https://github.com/annefou/weatherxbiodiversity-projection-nside128" } } } rows { name { value: "hasLimitationsDescription" } } rows { quad { p_iri { } o_literal { lex: "1. Substrate-coupling at projection time. Per-species ranking under SSP3-7.0 is grid-coupled at the projection step for species observed in fewer than ~10 historical Iberian cells at this substrate (~46 km, nside=128). This affects narrowly-distributed Pyrenean specialists (B. pyrenaeus, B. mucidus, B. mendax, B. wurflenii, B. monticola, B. mesomelas) \342\200\224 precisely the species the public most worries about. The full mechanism, validated and refuted hypotheses, and recommended reporting protocol are documented in the methodological sibling repo weatherxbiodiversity-substrate-sensitivity. The rankings reported in this Outcome are filtered per that diagnostic (n_cells \342\211\245 10, main-effects-only \316\267 at projection time).\n\n2. Reporting on \316\267, not p_extirp. As in the nside=64 sibling, Tier-2 reports the GLMM linear predictor \316\267 rather than its logistic transform. Future predictors lie 2\342\200\2234\317\203 outside the Tier-1 training distribution at this substrate \342\200\224 wider than at nside=64 because per-cell future-period climate deltas have higher within-cell variance at the finer grid. Absolute extirpation probabilities derived from this projection are NOT interpretable as-is.\n\n3. Negative-\316\267 species reflect random intercepts, not climate-driven benefit. The GLMM\'s species random effect dominates the projected \316\267 for B. terrestris and B. pascuorum, encoding lower-than-average historical extirpation susceptibility from the 1901\342\200\2232014 GBIF training data. All climate-driven term contributions are positive for both species at both substrates. The correct reading is \"historically robust species, with SSP3-7.0 adding moderate climate forcing on top\" \342\200\224 NOT \"projected to benefit from SSP3-7.0\".\n\n4. Sampling effort held at recent-period mean for the projection \342\200\224 same caveat as the nside=64 sibling.\n\n5. DestinE Climate DT archive coverage. SSP3-7.0 IFS-NEMO archive populated through 2039 only at time of analysis; mid- and end-of-century horizons deferred.\n\n6. Daily Tmax/Tmin from 4-times-daily 2t snapshots \342\200\224 same caveat as the nside=64 sibling. Defensible at decadal mean; biased high on Tmax extremes by an unknown but small amount.\n\n7. tp 1-time-per-day approximation \342\200\224 same caveat as the nside=64 sibling.\n\n8. Why nside=128 and not coarser-aggregated nside=64 at projection time. The canonical nside=64 sibling aggregates DestinE nside=128 data via parent-cell averaging before projection. This Outcome refits the GLMM at native nside=128 to eliminate any cross-substrate aggregation step between fit and projection. Both approaches yield substrate-robust headline coefficients within \302\26130%, but per-species rankings at the species-cell level differ (see substrate-sensitivity sibling for the exhaustive cross-substrate comparison).\n\n9. Geographic scope. Iberian peninsula only. The same caveat as the nside=64 sibling applies.\n\n10. n_cells distribution at nside=128. Because the cell area is 4\303\227 smaller than nside=64, the same physical species range generally translates to ~4\303\227 more occupied cells per species. This makes more species cross the n_cells \342\211\245 10 reliability threshold at nside=128 than at nside=64 (a positive side-effect of the resolution doubling), but the ranking concordance with the canonical nside=64 sibling is what bounds the trustworthy interpretation, not the per-substrate n_cells distribution alone." } } } rows { name { value: "hasOutcomeRepository" } } rows { prefix { value: "https://doi.org/10.5281/" } } rows { name { value: "zenodo.20113781" } } rows { quad { p_iri { } o_iri { prefix_id: 12 } } } rows { name { value: "hasValidationStatus" } } rows { name { value: "Validated" } } rows { quad { p_iri { prefix_id: 10 } o_iri { } } } rows { name { value: "isOutcomeOf" } } rows { prefix { value: "https://w3id.org/sciencelive/np/RAsGeFqqv4iQqrFNyjQwpSqKQYYk8JqGEjpCCJf1FtAM4/" } } rows { name { value: "soroye2020-iberian-bombus-healpix-nside128-substrate-extension" } } rows { quad { p_iri { } o_iri { prefix_id: 13 } } } rows { name { value: "wasAttributedTo" } } rows { prefix { value: "https://orcid.org/" } } rows { name { value: "0000-0002-1784-2920" } } rows { quad { s_iri { prefix_id: 2 name_id: 4 } p_iri { prefix_id: 5 name_id: 27 } o_iri { prefix_id: 14 } g_iri { prefix_id: 2 name_id: 7 } } } rows { prefix { value: "http://xmlns.com/foaf/0.1/" } } rows { name { value: "name" } } rows { quad { s_iri { prefix_id: 14 name_id: 28 } p_iri { prefix_id: 15 } o_literal { lex: "Anne Fouilloux" } g_iri { prefix_id: 2 name_id: 9 } } } rows { name { value: "created" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#dateTime" } } rows { quad { s_iri { prefix_id: 1 name_id: 1 } p_iri { prefix_id: 7 name_id: 30 } o_literal { lex: "2026-05-11T19:40:25.904Z" datatype: 2 } } } rows { name { value: "creator" } } rows { quad { p_iri { } o_iri { prefix_id: 14 name_id: 28 } } } rows { name { value: "license" } } rows { prefix { value: "https://creativecommons.org/licenses/by/4.0/" } } rows { quad { p_iri { prefix_id: 7 name_id: 32 } o_iri { prefix_id: 16 name_id: 2 } } } rows { name { value: "introduces" } } rows { quad { p_iri { prefix_id: 6 name_id: 33 } o_iri { prefix_id: 2 name_id: 12 } } } rows { name { value: "wasCreatedAt" } } rows { prefix { id: 8 value: "https://" } } rows { name { value: "platform.sciencelive4all.org" } } rows { quad { p_iri { prefix_id: 6 name_id: 34 } o_iri { prefix_id: 8 } } } rows { quad { p_iri { prefix_id: 11 name_id: 15 } o_literal { lex: "TEI-based extirpation mechanism: HEALPix nside=128 substrate extension on Iberian Bombus (full GLMM refit; SSP3-7.0 projection)" } } } rows { prefix { id: 3 value: "https://w3id.org/np/o/ntemplate/" } } rows { name { value: "wasCreatedFromTemplate" } } rows { prefix { id: 9 value: "https://w3id.org/np/" } } rows { name { value: "RA2zljn0Nw9SadppOyxZoh-_Rxosslrq-vYG-p9SttnJE" } } rows { quad { p_iri { prefix_id: 3 name_id: 36 } o_iri { prefix_id: 9 } } } rows { name { value: "sig" } } rows { name { value: "hasAlgorithm" } } rows { quad { s_iri { prefix_id: 2 } p_iri { prefix_id: 6 } o_literal { lex: "RSA" } } } rows { name { value: "hasPublicKey" } } rows { quad { p_iri { } o_literal { lex: "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" } } } rows { name { value: "hasSignature" } } rows { quad { p_iri { } o_literal { lex: "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" } } } rows { name { value: "hasSignatureTarget" } } rows { quad { p_iri { } o_iri { prefix_id: 1 name_id: 1 } } } rows { name { value: "signedBy" } } rows { quad { p_iri { prefix_id: 6 name_id: 43 } o_iri { prefix_id: 14 name_id: 28 } } }