rows { options { physical_type: PHYSICAL_STREAM_TYPE_QUADS max_name_table_size: 128 max_prefix_table_size: 16 max_datatype_table_size: 16 logical_type: LOGICAL_STREAM_TYPE_DATASETS version: 2 } } rows { prefix { value: "https://w3id.org/np/" } } rows { name { value: "RAjNIW4tx-TtxqGbSjtAdGlvbJ0koEOF3uuOgW6rzGKm4" } } rows { namespace { name: "this" value { prefix_id: 1 } } } rows { prefix { value: "https://w3id.org/np/RAjNIW4tx-TtxqGbSjtAdGlvbJ0koEOF3uuOgW6rzGKm4/" } } rows { name { } } rows { namespace { name: "sub" value { prefix_id: 2 } } } rows { prefix { value: "http://www.nanopub.org/nschema#" } } rows { namespace { name: "np" value { prefix_id: 3 name_id: 2 } } } rows { prefix { value: "https://w3id.org/np/o/ntemplate/" } } rows { namespace { name: "nt" value { prefix_id: 4 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/2001/XMLSchema#" } } rows { namespace { name: "xsd" value { prefix_id: 5 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/2004/02/skos/core#" } } rows { namespace { name: "skos" value { prefix_id: 6 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/2000/01/rdf-schema#" } } rows { namespace { name: "rdfs" value { prefix_id: 7 name_id: 2 } } } rows { prefix { value: "https://orcid.org/" } } rows { namespace { name: "orcid" value { prefix_id: 8 name_id: 2 } } } rows { prefix { value: "http://example.org/mvikg/" } } rows { namespace { name: "mvikg" value { prefix_id: 9 name_id: 2 } } } rows { prefix { value: "http://purl.org/dc/terms/" } } rows { namespace { name: "dct" value { prefix_id: 10 name_id: 2 } } } rows { prefix { value: "http://purl.org/nanopub/x/" } } rows { namespace { name: "npx" value { prefix_id: 11 name_id: 2 } } } rows { prefix { value: "https://w3id.org/biolink/vocab/" } } rows { namespace { name: "biolink" value { prefix_id: 12 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/ns/prov#" } } rows { namespace { name: "prov" value { prefix_id: 13 name_id: 2 } } } rows { prefix { value: "http://www.w3.org/ns/sosa/" } } rows { namespace { name: "sosa" value { prefix_id: 14 name_id: 2 } } } rows { name { value: "hasAssertion" } } rows { name { value: "assertion" } } rows { name { value: "Head" } } rows { quad { s_iri { prefix_id: 1 name_id: 1 } p_iri { prefix_id: 3 name_id: 3 } o_iri { prefix_id: 2 } g_iri { } } } rows { name { value: "hasProvenance" } } rows { name { value: "provenance" } } rows { quad { p_iri { prefix_id: 3 } o_iri { prefix_id: 2 } } } rows { name { value: "hasPublicationInfo" } } rows { name { value: "pubinfo" } } rows { quad { p_iri { prefix_id: 3 } o_iri { prefix_id: 2 } } } rows { prefix { value: "http://www.w3.org/1999/02/22-rdf-syntax-ns#" } } rows { name { value: "type" } } rows { name { value: "Nanopublication" } } rows { quad { p_iri { prefix_id: 15 } o_iri { prefix_id: 3 } } } rows { prefix { value: "https://w3id.org/np/RAGrrZrq4c4XMT6ddU9tolMzTRrrtB-FwKHF6dgqt6OQM/" } } rows { name { value: "variant" } } rows { name { value: "effect" } } rows { quad { s_iri { prefix_id: 16 } p_iri { prefix_id: 9 } o_literal { lex: "downregulates TTSS-1, SPI4, and flagellum/chemotaxis genes; loss of suppression of plant oxidative burst/pH response; no necrosis induced" } g_iri { prefix_id: 2 name_id: 4 } } } rows { name { value: "evidenceText" } } rows { quad { p_iri { prefix_id: 9 name_id: 14 } o_literal { lex: "The immune attenuated mutant of S. Typhimurium DeltarfaH down regulates the expression of the TTSS-1 and SPI4 genes and the flagellum/chemotaxis system" } } } rows { name { value: "isPartOf" } } rows { prefix { id: 4 value: "https://w3id.org/spaces/mvikg/r/" } } rows { name { value: "kg" } } rows { quad { p_iri { prefix_id: 10 } o_iri { prefix_id: 4 } } } rows { prefix { value: "http://purl.obolibrary.org/obo/" } } rows { name { value: "SO_0000159" } } rows { quad { p_iri { prefix_id: 15 name_id: 10 } o_iri { prefix_id: 5 name_id: 17 } } } rows { name { value: "SequenceVariant" } } rows { quad { o_iri { prefix_id: 12 } } } rows { name { value: "comment" } } rows { quad { p_iri { prefix_id: 7 } o_literal { lex: "VAR_002" } } } rows { name { value: "label" } } rows { quad { p_iri { } o_literal { lex: "PMC3082535-S._Typhimurium_DeltarfaH_mutant-variant1" } } } rows { prefix { value: "https://www.uniprot.org/uniprot/" } } rows { name { value: "A0A0H3NJR3" } } rows { name { value: "Gene" } } rows { quad { s_iri { prefix_id: 6 } p_iri { prefix_id: 15 name_id: 10 } o_iri { prefix_id: 12 name_id: 22 } } } rows { name { value: "isFeatureOfInterestOf" } } rows { prefix { id: 8 value: "https://w3id.org/np/RALMsaq2bChjm1MXTVvg_C-b3-_Tblua6CbDTe-SthkLE/" } } rows { name { value: "sample" } } rows { quad { p_iri { prefix_id: 14 } o_iri { prefix_id: 8 } } } rows { name { value: "has_sequence_variant" } } rows { quad { p_iri { prefix_id: 12 } o_iri { prefix_id: 16 name_id: 12 } } } rows { name { value: "wasDerivedFrom" } } rows { prefix { id: 11 value: "https://w3id.org/mvikg/abox#" } } rows { name { value: "VARIANT-VAR_002-A0A0H3NJR3" } } rows { quad { s_iri { prefix_id: 2 name_id: 4 } p_iri { prefix_id: 13 name_id: 26 } o_iri { prefix_id: 11 } g_iri { prefix_id: 2 name_id: 7 } } } rows { name { value: "created" } } rows { datatype { value: "http://www.w3.org/2001/XMLSchema#dateTime" } } rows { quad { s_iri { prefix_id: 1 name_id: 1 } p_iri { prefix_id: 10 name_id: 28 } o_literal { lex: "2026-11-10T10:29:01Z" datatype: 1 } g_iri { prefix_id: 2 name_id: 9 } } } rows { name { value: "creator" } } rows { prefix { id: 3 value: "https://orcid.org/" } } rows { name { value: "0009-0005-5515-1230" } } rows { quad { p_iri { prefix_id: 10 name_id: 29 } o_iri { prefix_id: 3 } } } rows { name { value: "license" } } rows { prefix { id: 9 value: "https://creativecommons.org/licenses/by/4.0/" } } rows { quad { p_iri { prefix_id: 10 } o_iri { prefix_id: 9 name_id: 2 } } } rows { prefix { id: 4 value: "http://purl.org/nanopub/x/" } } rows { name { value: "hasNanopubType" } } rows { name { value: "ExampleNanopub" } } rows { quad { p_iri { prefix_id: 4 name_id: 32 } o_iri { } } } rows { name { value: "introduces" } } rows { quad { p_iri { } o_iri { prefix_id: 16 name_id: 12 } } } rows { name { value: "supersedes" } } rows { name { value: "RAGrrZrq4c4XMT6ddU9tolMzTRrrtB-FwKHF6dgqt6OQM" } } rows { quad { p_iri { prefix_id: 4 name_id: 35 } o_iri { prefix_id: 1 } } } rows { prefix { value: "http://www.w3.org/2004/02/skos/core#" } } rows { name { value: "changeNote" } } rows { quad { p_iri { prefix_id: 5 } o_literal { lex: "Corrected the nt:wasCreatedFromProvenanceTemplate/PubinfoTemplate links, which previously pointed at the meta-templates used to define templates rather than the actual provenance/pubinfo templates used to create this nanopub. Also stabilized npx:introduces to this record\'s originally published resource IRI so repeated corrections resolve to one current version instead of appearing as unrelated records." } } } rows { prefix { id: 7 value: "https://w3id.org/np/o/ntemplate/" } } rows { name { value: "wasCreatedFromProvenanceTemplate" } } rows { name { value: "RAHKGU7g81YLKWl0S7g0oKdiRD5LhcPFMjVkAgLnipR_g" } } rows { quad { p_iri { prefix_id: 7 } o_iri { prefix_id: 1 } } } rows { name { value: "wasCreatedFromPubinfoTemplate" } } rows { name { value: "RA-N4_kFxcruvBTlo1yJv29E4SLOXsx5KO_th69PprMrA" } } rows { quad { p_iri { prefix_id: 7 } o_iri { prefix_id: 1 } } } rows { name { value: "RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8" } } rows { quad { o_iri { } } } rows { name { value: "RAKc76yHLDbloE6ObluzYQsfX37v6qrZXbYeIKpe8-YUo" } } rows { quad { o_iri { } } } rows { name { value: "RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw" } } rows { quad { o_iri { } } } rows { name { value: "wasCreatedFromTemplate" } } rows { prefix { id: 6 value: "https://w3id.org/np/RAnlONjGChImRjDeXxTwrTmndhfv1guES7EnXlp1CaE3g/" } } rows { name { value: "templateVersion" } } rows { quad { p_iri { prefix_id: 7 } o_iri { prefix_id: 6 } } } rows { name { value: "sig" } } rows { name { value: "hasAlgorithm" } } rows { quad { s_iri { prefix_id: 2 } p_iri { prefix_id: 4 } o_literal { lex: "RSA" } } } rows { name { value: "hasPublicKey" } } rows { quad { p_iri { } o_literal { lex: "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAjO3oH8Lq/l1oZIUY3FlCz5DnndybGvAhBdmEJ/yq7Nv3GZEYPrEro23rCBCp0GiriOXlVbk61pA/7JFE6tqzTresINW6QQMxE9sIhCBlX4cG66JFD8ud6bMvUyzCR8LQA6zfrSbafGE06rvglJd4MDUcTwvUKqtL9UCnOaowVfnZ3sPOe9EqlmJuO3iHGxBSXMPOPEJZUzMXsFDWFuMZTnrR8gY3r5nVF5a8L/MD135ZH8qW5yGXOB28CmVYCAbw2o07QEKzyzFKN+W1gfnprYZvuKzwGexnzcdzc1S8N/M5bzhWQ40EKCEqgUE8c81OzEMm1HUlUKEJ/o5I/FKKAwIDAQAB" } } } rows { name { value: "hasSignature" } } rows { quad { p_iri { } o_literal { lex: "NGgk01nGv9Tg/jY6RLP9qs5x4qqskO0BUxhFJB95QPeiOwq0QKBmjqVHlDAs53bqlEj55Yo5wrJNzKi492Iu/EepYrOWsHNtav5iS6kNp21/PpNLuhI+V3pWb5BPU84MuBkQ/HJhvBvUlckyDnwxwdOWg+iq86NJMxysQ4tuCpQVhP1ftRprB3Oz6XoHDA3WBl/Q7D2fMHcFQUpHLWlnAycll1OtBGak/0edoP+LPGGVKrLbfcGCCjNsokZVGHDm4Mrc6uZLBuvzL7Xwo6hdltr00DrKd0GkcrB88zYNwUtHxbxfMBrIWLxdUP0UnIOdddVc0fA1bH7F1Mgdnkf9rg==" } } } rows { name { value: "hasSignatureTarget" } } rows { quad { p_iri { } o_iri { prefix_id: 1 name_id: 1 } } } rows { name { value: "signedBy" } } rows { quad { p_iri { prefix_id: 4 name_id: 52 } o_iri { prefix_id: 3 name_id: 30 } } }