Nanopublication: CoxBase as first integrated platform for Coxiella burnetii genotyping
type: ExampleNanopub
created: 2026-01-10T22:00:00Z
license: https://creativecommons.org/publicdomain/zero/1.0/
created by: https://orcid.org/0009-0005-7752-8203
comment: This nanopublication describes CoxBase, the first comprehensive online platform combining five genotyping methods for epidemiological surveillance and analysis of Coxiella burnetii
was attributed to: https://orcid.org/0009-0005-7752-8203
type: Nanopublication
has assertion: assertion
has provenance: provenance
has publication info: pubinfo

sig
has algorithm: RSA

CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic Sequences
type: AcademicArticle
type: ScholarlyArticle
doi: 10.1128/mSystems.00403-21
author: https://orcid.org/0000-0002-1481-2996
date published: 2021
is part of: mSystems

mSystems
type: Periodical
issn: 2379-5077

CoxBase
type: data_0957
type: SoftwareApplication
has function: operation_0567
has function: operation 3196
has topic: topic_0622
has topic: topic 3053
has topic: topic 3301
has topic: topic 3673
alternate name: CoxBase: Online Platform for Coxiella burnetii Genomic Sequences
application category: Bioinformatics
application category: Epidemiological surveillance
code repository: CoxBase-Webapp
description: First platform to combine all disparate genotyping systems for Coxiella burnetii including MLVA, MST, IS1111, adaA and plasmid typing methods
feature list: Genotyping
feature list: Geographic mapping
feature list: Metadata visualization
feature list: Phylogenetic analysis
license: Open source
operating system: Web-based
programming language: JavaScript
programming language: Python
provider: 01js2sh04
software version: 1.0
SIO_000216: 400