Nanopublication

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ID

https://w3id.org/kpxl/ios/ds/np/RApENox415XAWc1rd3VWGlQ9QthTXgoKxgeSEHmDZvScc

Formats

.trig | .trig.txt | .jelly | .jelly.txt | .jsonld | .jsonld.txt | .nq | .nq.txt | .xml | .xml.txt

Content

@prefix this: <https://w3id.org/kpxl/ios/ds/np/RApENox415XAWc1rd3VWGlQ9QthTXgoKxgeSEHmDZvScc> .
@prefix sub: <https://w3id.org/kpxl/ios/ds/np/RApENox415XAWc1rd3VWGlQ9QthTXgoKxgeSEHmDZvScc#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix ns1: <http://purl.org/np/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix sp: <https://w3id.org/linkflows/superpattern/terms/> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  sub:spi a sp:SuperPatternInstance;
    rdfs:label "The protein TDP-43 represses cryptic exon inclusion in the gene UNC13A.";
    sp:hasContextClass <http://www.wikidata.org/entity/Q18036664>;
    sp:hasObjectClass <http://purl.obolibrary.org/obo/VariO_0504>;
    sp:hasQualifier sp:generallyQualifier;
    sp:hasRelation sp:inhibits;
    sp:hasSubjectClass <http://www.wikidata.org/entity/Q21133247> .
}

sub:provenance {
  sub:activity a sp:FormalizationActivity;
    prov:used sub:quote, <https://www.biorxiv.org/content/10.1101/2021.04.02.438213v1>;
    prov:wasAssociatedWith orcid:0000-0003-2310-3013 .
  
  sub:assertion prov:wasGeneratedBy sub:activity .
  
  sub:quote prov:value "Here we show that TDP-43 represses a cryptic exon splicing event in UNC13A.";
    prov:wasQuotedFrom <https://www.biorxiv.org/content/10.1101/2021.04.02.438213v1> .
}

sub:pubinfo {
  <http://www.wikidata.org/entity/Q18036664> nt:hasLabelFromApi "UNC13A - protein-coding gene in the species Homo sapiens" .
  
  <http://www.wikidata.org/entity/Q21133247> nt:hasLabelFromApi "TAR DNA binding protein - mammalian protein found in Homo sapiens" .
  
  orcid:0000-0002-1267-0234 foaf:name "Tobias Kuhn" .
  
  sub:author-list rdf:_1 orcid:0000-0003-2310-3013 .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD4Wj537OijfOWVtsHMznuXKISqBhtGDQZfdO6pbb4hg9EHMcUFGTLbWaPrP783PHv8HMAAPjvEkHLaOHMIknqhaIa5236lfBO3r+ljVdYBElBcLvROmwG+ZGtmPNZf7lMhI15xf5TfoaSa84AFRd5J2EXekK6PhaFQhRm1IpSYtwIDAQAB";
    npx:hasSignature "yD00kj02L+bnkKfKgFy+rz/K746VR7cJ4lVdKii0OlvDhGrzxRUeNnnNGa70Qi58KUIR9gIWm5Pu09eEpYqL8ylkVVVQ8kZXpeeLHCtwcRFvyckioZIfk63nnMnGbjPQHHujvWVs1NwoZ466inLHQmUMfMiveNfzDGJ2O837dm0=";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0000-0002-1267-0234 .
  
  this: dct:created "2025-04-09T06:18:51.986Z"^^xsd:dateTime;
    dct:creator orcid:0000-0002-1267-0234;
    dct:isPartOf <https://doi.org/10.3233/DS-210046>;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:hasNanopubType <https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub>;
    npx:introduces sub:spi;
    npx:wasCreatedAt <https://nanodash.knowledgepixels.com/>;
    <http://purl.org/ontology/bibo/authorList> sub:author-list;
    prov:wasDerivedFrom ns1:RAXkuXJ4IK10Ai9F39_tOFDy6ewi7znau6OQhUEXP4nPc;
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    nt:wasCreatedFromPubinfoTemplate ns1:RAOGu9Lh0BD4tbIRB9RG6RGRA_ObDh75NTbIqaWgxxs8M,
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      <https://w3id.org/np/RA5R_qv3VsZIrDKd8Mr37x3HoKCsKkwN5tJVqgQsKhjTE>, <https://w3id.org/np/RARW4MsFkHuwjycNElvEVtuMjpf4yWDL10-0C5l2MqqRQ>,
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}