Nanopublication

ID

https://w3id.org/np/RApHiYYW9sEGFtcpPj1hmqj6RTM8EQdFxyDmThNlvNZwY
Formats

Content

@prefix this: <https://w3id.org/np/RApHiYYW9sEGFtcpPj1hmqj6RTM8EQdFxyDmThNlvNZwY> .
@prefix sub: <https://w3id.org/np/RApHiYYW9sEGFtcpPj1hmqj6RTM8EQdFxyDmThNlvNZwY/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix mvikg: <http://example.org/mvikg/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix sosa: <http://www.w3.org/ns/sosa/> .

sub:Head {
  this: a np:Nanopublication;
    np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo .
}

sub:assertion {
  <https://w3id.org/np/RAcr4eI4W6DBBBB8ewO7au00aBC0BKeKxp6pXUMwzS4JE/variant> a <http://purl.obolibrary.org/obo/SO_0000694>,
      biolink:SequenceVariant;
    mvikg:effect "formation of filaments after invasion of some cell types, not seen in 12023 which lacks this mutation";
    mvikg:evidenceText "SL1344 carries a mutation in hisG which leads to the formation of filaments after invasion of some cell types that is not seen in 12023, which lacks this mutation";
    dct:isPartOf <https://w3id.org/spaces/mvikg/r/kg>;
    rdfs:comment "VAR_002";
    rdfs:label "PMC3167892-S._Typhimurium_SL1344-variant1" .
  
  <https://www.uniprot.org/uniprot/P00499> a biolink:Gene;
    sosa:isFeatureOfInterestOf <https://w3id.org/np/RAi2rOoOPS5CAIDCKdk62WoQsoJTI9O7B0vfWSXTuGvtw/sample>;
    biolink:has_sequence_variant <https://w3id.org/np/RAcr4eI4W6DBBBB8ewO7au00aBC0BKeKxp6pXUMwzS4JE/variant> .
}

sub:provenance {
  sub:assertion prov:wasDerivedFrom <https://w3id.org/mvikg/abox#VARIANT-VAR_002-P00499> .
}

sub:pubinfo {
  this: dct:created "2026-11-10T10:34:58Z"^^xsd:dateTime;
    dct:creator orcid:0009-0005-5515-1230;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:hasNanopubType npx:ExampleNanopub;
    npx:introduces <https://w3id.org/np/RAcr4eI4W6DBBBB8ewO7au00aBC0BKeKxp6pXUMwzS4JE/variant>;
    npx:supersedes <https://w3id.org/np/RAVgNqTG-9XHsywzZXv1P2x1FKQOtwPTBlMzE1WraXjqI>;
    skos:changeNote "Adds the change note that was missing from the immediately preceding version (which corrected the provenance/pubinfo template links and stabilized npx:introduces).";
    nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RAHKGU7g81YLKWl0S7g0oKdiRD5LhcPFMjVkAgLnipR_g>;
    nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RA-N4_kFxcruvBTlo1yJv29E4SLOXsx5KO_th69PprMrA>,
      <https://w3id.org/np/RACJ58Gvyn91LqCKIO9zu1eijDQIeEff28iyDrJgjSJF8>, <https://w3id.org/np/RAKc76yHLDbloE6ObluzYQsfX37v6qrZXbYeIKpe8-YUo>,
      <https://w3id.org/np/RAoTD7udB2KtUuOuAe74tJi1t3VzK0DyWS7rYVAq1GRvw>;
    nt:wasCreatedFromTemplate <https://w3id.org/np/RAnlONjGChImRjDeXxTwrTmndhfv1guES7EnXlp1CaE3g/templateVersion> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAjO3oH8Lq/l1oZIUY3FlCz5DnndybGvAhBdmEJ/yq7Nv3GZEYPrEro23rCBCp0GiriOXlVbk61pA/7JFE6tqzTresINW6QQMxE9sIhCBlX4cG66JFD8ud6bMvUyzCR8LQA6zfrSbafGE06rvglJd4MDUcTwvUKqtL9UCnOaowVfnZ3sPOe9EqlmJuO3iHGxBSXMPOPEJZUzMXsFDWFuMZTnrR8gY3r5nVF5a8L/MD135ZH8qW5yGXOB28CmVYCAbw2o07QEKzyzFKN+W1gfnprYZvuKzwGexnzcdzc1S8N/M5bzhWQ40EKCEqgUE8c81OzEMm1HUlUKEJ/o5I/FKKAwIDAQAB";
    npx:hasSignature "gcMEmkRDSduETJioT1HZZ2J9b3wZpjhFgfmWHNvYeVQT5wDFCamcso8tfBQKtMkRT8CBv0sIpLnt50+8qyaHmlZztB8RnX1nefC/RDgdVpOQfq3WQhJdAcc+L+oWCjyPoQwsDqQ59kHfm50w4aYN/TbComqlFdExt2dCrizv5/IaB4074QY5YeocLT7FrYgIBvLOzocoWqBvZzt7kMf/ffe7J8+89KAUCt+Dw83jEYnaG74m1KfOxQYaM/HUo238oIIX5Ud1bFrS7FgmPdbt4ju+C0RlYBe3Lo7hKlYgQ6VdokqripX3L6NlhPWs39nod98FX0ra8wpUTi0/yksQ/Q==";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0009-0005-5515-1230 .
}